RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PPIFP30405 207 aaKnown RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 PNPLA4P41247 253 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 THBS3P49746 956 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 RAB40BQ12829 278 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 PSG7Q13046 419 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ANXA2RQ3ZCQ2 193 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 DCAF12Q5T6F0 453 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ANKRD16Q6P6B7 361 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ACOT1Q86TX2 421 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 CISD2Q8N5K1 135 aaKnown RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 OR2AJ1Q8NGZ0 328 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 TM2D2Q9BX73 214 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ST20Q9HBF5 79 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 HES4Q9HCC6 221 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 MANBALQ9NQG1 85 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 FBXL7Q9UJT9 491 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 A0A1W2PQH9 124 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 DHHO43323 396 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 MT-ATP8P03928 68 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 EGR1P18146 543 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 CXorf66Q5JRM2 361 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-201ENST00000258733 SAP25Q8TEE9 199 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 PIGCQ92535 297 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 NAT6Q93015 286 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 SMIM19Q96E16 107 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 SPAG8Q99932 426 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-201ENST00000258733 KCNK15Q9H427 330 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 ADAMTSL1Q8N6G6 1762 aa6.65□□□□□ -1.34
GPNMB-201ENST00000258733 FAM95CA0A1B0GW59 222 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 E9PLN8 166 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 FCN3O75636 299 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 JTBO76095 146 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 CA1P00915 261 aaPredicted RBP6.65□□□□□ -1.35
GPNMB-201ENST00000258733 IL3P08700 152 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 CT45A6P0DMU7 189 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 CT45A5P0DMU8 189 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 CT45A7P0DMV0 189 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 MNX1P50219 401 aaPredicted RBP6.65□□□□□ -1.35
GPNMB-201ENST00000258733 MFGE8Q08431 387 aaPredicted RBP6.65□□□□□ -1.35
GPNMB-201ENST00000258733 MSMO1Q15800 293 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 CT45A1Q5HYN5 189 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 FAM27D1Q5T7N8 215 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 ZFAND6Q6FIF0 208 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 OR52E2Q8NGJ4 325 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 CT45A3Q8NHU0 189 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 Q8TCH9 128 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 NUDT8Q8WV74 236 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 HPDLQ96IR7 371 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 PGLYRP2Q96PD5 576 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 DUX3Q96PT4 197 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 INSIG2Q9Y5U4 225 aa6.65□□□□□ -1.35
GPNMB-201ENST00000258733 TRBV5-3A0A0A0MS03 114 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 LOC107984640A0A0U1RRK4 108 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 hADV38S2A0JD32 116 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 C9orf118A6NHY6 69 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 ZNF785A8K8V0 405 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 H0YIZ8 118 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 SH2D1BO14796 132 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 HLA-AP01891 365 aaKnown RBP6.64□□□□□ -1.35
GPNMB-201ENST00000258733 PRH1P02810 166 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 HSPB1P04792 205 aaKnown RBP6.64□□□□□ -1.35
GPNMB-201ENST00000258733 PPP1CCP36873 323 aaKnown RBP6.64□□□□□ -1.35
GPNMB-201ENST00000258733 MANFP55145 182 aaKnown RBP6.64□□□□□ -1.35
GPNMB-201ENST00000258733 WDR5P61964 334 aaKnown RBP6.64□□□□□ -1.35
GPNMB-201ENST00000258733 C6orf136Q5SQH8 315 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 C1orf220Q5T0J3 134 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 NCBP2-AS2Q69YL0 99 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 SBSNQ6UWP8 590 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 TMEM178AQ8NBL3 297 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 DOK4Q8TEW6 326 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 PAAF1Q9BRP4 392 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 SAMD10Q9BYL1 202 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 OR2D2Q9H210 308 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 BANF2Q9H503 90 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 MCTS1Q9ULC4 181 aaKnown RBP6.64□□□□□ -1.35
GPNMB-201ENST00000258733 A0A1B0GV50 99 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 A0A1W2PQU0 124 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 C3orf80F5H4A9 247 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 TAPBPO15533 448 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 MT-CO3P00414 261 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 CD55P08174 381 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 PPICP45877 212 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 RND3P61587 244 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 LCN6P62502 163 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 CYCSP99999 105 aaKnown RBP6.64□□□□□ -1.35
GPNMB-201ENST00000258733 RELBQ01201 579 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 RUNX3Q13761 415 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 IL13RA2Q14627 380 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 C3AR1Q16581 482 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 C12orf73Q69YU5 71 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 ADAMTSL5Q6ZMM2 481 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 OR10P1Q8NGE3 313 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 OR51G1Q8NGK1 321 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 OR10D3Q8NH80 312 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 BAALCQ8WXS3 180 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 SCARF2Q96GP6 870 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-201ENST00000258733 MS4A4AQ96JQ5 239 aa6.64□□□□□ -1.35
GPNMB-201ENST00000258733 TRBV4-1A0A0J9YWV2 114 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms