RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CLINT1Q14677 625 aa11.55□□□□□ -0.56
PRPF38A-201ENST00000257181 MBNL2Q5VZF2 373 aaKnown RBP11.55□□□□□ -0.56
PRPF38A-201ENST00000257181 TMEM217Q8N7C4 229 aa11.55□□□□□ -0.56
PRPF38A-201ENST00000257181 OR4D10Q8NGI6 311 aa11.55□□□□□ -0.56
PRPF38A-201ENST00000257181 RNF114Q9Y508 228 aa11.55□□□□□ -0.56
PRPF38A-201ENST00000257181 LILRA1O75019 489 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 MFAP4P55083 255 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 ZNF835Q9Y2P0 537 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 IGHV3OR15-7A0A075B7D8 119 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 hCG_38984A0A1B0GV85 526 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 ZNF716A6NP11 495 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 DEFB108AA8MXU0 73 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 TNFSF12O43508 249 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 TTRP02766 147 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 RFPL3SP0C7P2 107 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 RPL12P30050 165 aaKnown RBP11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 GAMTQ14353 236 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 UNQ5815/PRO19632Q6UWF5 114 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 OR8D4Q8NGM9 314 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 ASCL3Q9NQ33 180 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 TECRQ9NZ01 308 aaKnown RBP11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 CHST1O43916 411 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 SUCLG1P53597 346 aaKnown RBP11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 PPIL3Q9H2H8 161 aaKnown RBP11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 NPIPB11E5RHQ5 1161 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 OR10K2Q6IF99 312 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 MMP26Q9NRE1 261 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 FRMPD3Q5JV73 1810 aa11.54□□□□□ -0.56
PRPF38A-201ENST00000257181 PAX6P26367 422 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 FNDC7Q5VTL7 733 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 C6orf201Q7Z4U5 140 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 PDPNQ86YL7 162 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 METTL1Q9UBP6 276 aaKnown RBP11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 C1QTNF9BB2RNN3 333 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 RHBDL1O75783 438 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 OR2H2O95918 312 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 C1QTNF9P0C862 333 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 SLC25A4P12235 298 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 IL11P20809 199 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 RPL8P62917 257 aaKnown RBP11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 OR5I1Q13606 314 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 ZNF674Q2M3X9 581 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 MINOS1Q5TGZ0 78 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 DTX1Q86Y01 620 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 FRRS1LQ9P0K9 344 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 ST6GALNAC2Q9UJ37 374 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 MINOS1-NBL1R4GNA1 71 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 NKX2-6A6NCS4 301 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 ZG16O60844 167 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 SPDEFO95238 335 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 DUS4LO95620 317 aaKnown RBP11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 CDS2O95674 445 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 HIST2H3AQ71DI3 136 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 NIPSNAP3BQ9BS92 247 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 AK3Q9UIJ7 227 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 F8W036 122 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 LALBAP00709 142 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 CD3DP04234 171 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 CLEC2LP0C7M8 214 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 OXA1LQ15070 435 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 LIAT1Q6ZQX7 453 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 U3KQ87 197 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 MYO7AQ13402 2215 aa11.53□□□□□ -0.56
PRPF38A-201ENST00000257181 I3L521 148 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 MYOD1P15172 320 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 SLC38A11Q08AI6 406 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 NKX6-2Q9C056 277 aaPredicted RBP11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 LYRM2Q9NU23 88 aaPredicted RBP11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 PLXNA3P51805 1871 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 FAM157AC9JC47 383 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 HPXP02790 462 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 DESI1Q6ICB0 168 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 HOGA1Q86XE5 327 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 P2RX4Q99571 388 aa11.52□□□□□ -0.56
PRPF38A-201ENST00000257181 IGHV3-43A0A0B4J1X8 118 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 FAM90A26D6RGX4 464 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 GEMIN2O14893 280 aaKnown RBP11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 NDUFB6O95139 128 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 IGHV3-43DP0DP04 118 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 OR5T1Q8NG75 326 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 RCL1Q9Y2P8 373 aaKnown RBP11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 TMEM155Q4W5P6 130 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 NRTNQ99748 197 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 SSX3Q99909 188 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 SPRR3Q9UBC9 169 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 OR51B2Q9Y5P1 312 aa11.52□□□□□ -0.57
PRPF38A-201ENST00000257181 TMEM104Q8NE00 496 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 OR13C5Q8NGS8 318 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 MMP28Q9H239 520 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 A0A0B4J2A0 478 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 H3BMH7 237 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 RPEL1Q2QD12 228 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 WDR31Q8NA23 367 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 CLEC5AQ9NY25 188 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 SHPKQ9UHJ6 478 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 A0A1W2PRD5 423 aa11.51□□□□□ -0.57
PRPF38A-201ENST00000257181 A0A1W2PRF3 423 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms