RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SOX2P48431 317 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 GBX2P52951 348 aaPredicted RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 FHL3Q13643 280 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 LTC4SQ16873 150 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 CCDC58Q4VC31 144 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 FAM53AQ6NSI3 398 aaPredicted RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 ZFP1Q6P2D0 407 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 TEX38Q6PEX7 206 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 GAPTQ8N292 157 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 FAM71E2Q8N5Q1 922 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 ZNF439Q8NDP4 499 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 OR52N1Q8NH53 320 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 MYOZ3Q8TDC0 251 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 GPR148Q8TDV2 347 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 RTN4IP1Q8WWV3 396 aaPredicted RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 TMEM106AQ96A25 262 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 Q96MT0 163 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 GPER1Q99527 375 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 FGF20Q9NP95 211 aaPredicted RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 GFOD1Q9NXC2 390 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 RCC2Q9P258 522 aaKnown RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 LSM4Q9Y4Z0 139 aaKnown RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 SIRT4Q9Y6E7 314 aaPredicted RBP8.08□□□□□ -1.12
VPS50-201ENST00000251739 RYR2Q92736 4967 aa8.08□□□□□ -1.12
VPS50-201ENST00000251739 IGHV3-72A0A0B4J1Y9 119 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 CCL24O00175 119 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 ORC5O43913 435 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 WBP4O75554 376 aaKnown RBP8.07□□□□□ -1.12
VPS50-201ENST00000251739 GPX5O75715 221 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 IGHG4P01861 327 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 CD2P06729 351 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 IGFBP3P17936 291 aaPredicted RBP8.07□□□□□ -1.12
VPS50-201ENST00000251739 GZMHP20718 246 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 CD1BP29016 333 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 CDX1P47902 265 aaPredicted RBP8.07□□□□□ -1.12
VPS50-201ENST00000251739 GP2P55259 537 aaKnown RBP8.07□□□□□ -1.12
VPS50-201ENST00000251739 DGCR2P98153 550 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 FOXE3Q13461 319 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 MPV17LQ2QL34 196 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 DEFB136Q30KP8 78 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 RPL22L1Q6P5R6 122 aaKnown RBP8.07□□□□□ -1.12
VPS50-201ENST00000251739 ZNF497Q6ZNH5 498 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 LCNL1Q6ZST4 164 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 SLC25A48Q6ZT89 311 aaKnown RBP8.07□□□□□ -1.12
VPS50-201ENST00000251739 SATL1Q86VE3 508 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 OR2T10Q8NGZ9 312 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 DUX3Q96PT4 197 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 SLC29A1Q99808 456 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 HSPB9Q9BQS6 159 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 FAM192AQ9GZU8 254 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 DCLRE1BQ9H816 532 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 TMEM138Q9NPI0 162 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 FAM118AQ9NWS6 357 aa8.07□□□□□ -1.12
VPS50-201ENST00000251739 RPL36Q9Y3U8 105 aaKnown RBP8.07□□□□□ -1.12
VPS50-201ENST00000251739 CSMD3Q7Z407 3707 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 TRBV5-5A0A0J9YX44 114 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 A0A1W2PP11 408 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 MAGEA13PA6NCF6 341 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 ZNF736B4DX44 427 aaPredicted RBP8.06□□□□□ -1.12
VPS50-201ENST00000251739 C12orf77C9JDV5 145 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 SDCBPO00560 298 aaPredicted RBP8.06□□□□□ -1.12
VPS50-201ENST00000251739 SLC31A2O15432 143 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 MAGEB3O15480 346 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 OGG1O15527 345 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 RAMP3O60896 148 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 MOSP00540 346 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 LALBAP00709 142 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 MT-ND4P03905 459 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 IGF1P05019 195 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 ELANEP08246 267 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 ZNF93P35789 620 aaPredicted RBP8.06□□□□□ -1.12
VPS50-201ENST00000251739 ETV1P50549 477 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 LUMP51884 338 aaPredicted RBP8.06□□□□□ -1.12
VPS50-201ENST00000251739 GPR50Q13585 617 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 KIR2DS1Q14954 304 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 SMN1Q16637 294 aaKnown RBP8.06□□□□□ -1.12
VPS50-201ENST00000251739 PNLIPRP3Q17RR3 467 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 TMEM30BQ3MIR4 351 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 DDI2Q5TDH0 399 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 MOB3BQ86TA1 216 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 LYPD6Q86Y78 171 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 ZNF485Q8NCK3 441 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 OR8H1Q8NGG4 311 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 OR13C5Q8NGS8 318 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 OR8U1Q8NH10 309 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 UBALD1Q8TB05 177 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 ARL11Q969Q4 196 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 ORAI1Q96D31 301 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 SMIM19Q96E16 107 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 S1PR3Q99500 378 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 LYSTQ99698 3801 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 C9orf16Q9BUW7 83 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 METTL9Q9H1A3 318 aa8.06□□□□□ -1.12
VPS50-201ENST00000251739 PAK1IP1Q9NWT1 392 aaPredicted RBP8.06□□□□□ -1.12
VPS50-201ENST00000251739 ZMAT5Q9UDW3 170 aaKnown RBP8.06□□□□□ -1.12
VPS50-201ENST00000251739 IGHV3-43A0A0B4J1X8 118 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 LOC100130705A0A1B0GUX0 176 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 TXNL1O43396 289 aa8.05□□□□□ -1.12
VPS50-201ENST00000251739 ZNF780AO75290 641 aaPredicted RBP8.05□□□□□ -1.12
VPS50-201ENST00000251739 SC5DO75845 299 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms