RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 GHSRQ92847 366 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 EAF1Q96JC9 268 aaPredicted RBP16.64■□□□□ 0.25
NEDD8-201ENST00000250495 MCRIP2Q9BUT9 160 aaKnown RBP16.64■□□□□ 0.25
NEDD8-201ENST00000250495 SPACA1Q9HBV2 294 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 RAB9BQ9NP90 201 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 GFOD1Q9NXC2 390 aa16.64■□□□□ 0.25
NEDD8-201ENST00000250495 DIMT1Q9UNQ2 313 aaKnown RBP16.64■□□□□ 0.25
NEDD8-201ENST00000250495 NCBP2LA6PVI3 153 aaKnown RBP16.63■□□□□ 0.25
NEDD8-201ENST00000250495 NUDT19A8MXV4 375 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 MT-ND4P03905 459 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 GNAO1P09471 354 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 IGFBP3P17936 291 aaPredicted RBP16.63■□□□□ 0.25
NEDD8-201ENST00000250495 MYCNOSP40205 109 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 EGFEM1PQ0D2K5 195 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 Q3ZCU0 254 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 Q499Y3 187 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 YIF1BQ5BJH7 314 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 TGIF2LXQ8IUE1 241 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 STPG2Q8N412 459 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 TSPAN14Q8NG11 270 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 ORAI1Q96D31 301 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 LINC00527Q9UJ94 153 aa16.63■□□□□ 0.25
NEDD8-201ENST00000250495 TRBV5-5A0A0J9YX44 114 aa16.62■□□□□ 0.25
NEDD8-201ENST00000250495 REG1BP48304 166 aa16.62■□□□□ 0.25
NEDD8-201ENST00000250495 ETV3LQ6ZN32 361 aa16.62■□□□□ 0.25
NEDD8-201ENST00000250495 ZNF497Q6ZNH5 498 aa16.62■□□□□ 0.25
NEDD8-201ENST00000250495 IZUMO1Q8IYV9 350 aa16.62■□□□□ 0.25
NEDD8-201ENST00000250495 MRPS24Q96EL2 167 aaKnown RBP16.62■□□□□ 0.25
NEDD8-201ENST00000250495 TMEM80Q96HE8 168 aa16.62■□□□□ 0.25
NEDD8-201ENST00000250495 GON7Q9BXV9 100 aa16.62■□□□□ 0.25
NEDD8-201ENST00000250495 LIN7CQ9NUP9 197 aaKnown RBP16.62■□□□□ 0.25
NEDD8-201ENST00000250495 CLEC2DQ9UHP7 191 aa16.62■□□□□ 0.25
NEDD8-201ENST00000250495 A0A087WXM4 84 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 IGHV3-72A0A0B4J1Y9 119 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 A0A1W2PP11 408 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 WI2-2373I1.2A0A1W2PRP0 233 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 MCRIP1C9JLW8 97 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 AIPO00170 330 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 AP4M1O00189 453 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 LALBAP00709 142 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 TFAP2AP05549 437 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 CD1BP29016 333 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 HOXD3P31249 432 aaPredicted RBP16.61■□□□□ 0.25
NEDD8-201ENST00000250495 DMKNQ6E0U4 476 aaPredicted RBP16.61■□□□□ 0.25
NEDD8-201ENST00000250495 TEX38Q6PEX7 206 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 C8orf86Q6ZUL3 223 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 C8orf59Q8N0T1 100 aaPredicted RBP16.61■□□□□ 0.25
NEDD8-201ENST00000250495 KLHL30-AS1Q8NEE0 82 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 OR13C5Q8NGS8 318 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 ST6GALNAC6Q969X2 333 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 ABCG5Q9H222 651 aa16.61■□□□□ 0.25
NEDD8-201ENST00000250495 ZMAT5Q9UDW3 170 aaKnown RBP16.61■□□□□ 0.25
NEDD8-201ENST00000250495 IGHV3-43A0A0B4J1X8 118 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 SPINT2O43291 252 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 IGHV3-43DP0DP04 118 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 PNLIPRP3Q17RR3 467 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 TMEM30BQ3MIR4 351 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 VAX1Q5SQQ9 334 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 UNQ9370/PRO34162Q6UXP9 181 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 ZNF695Q8IW36 515 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 Q8N6K4 173 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 SETD9Q8NE22 299 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 UBALD1Q8TB05 177 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 RTN4IP1Q8WWV3 396 aaPredicted RBP16.6■□□□□ 0.25
NEDD8-201ENST00000250495 TRAPPC2LQ9UL33 140 aa16.6■□□□□ 0.25
NEDD8-201ENST00000250495 LINC01548A6NM66 108 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 TXNL1O43396 289 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 MOSP00540 346 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 GPR12P47775 334 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 RPS11P62280 158 aaKnown RBP eCLIP16.59■□□□□ 0.25
NEDD8-201ENST00000250495 RBM48Q5RL73 367 aaKnown RBP16.59■□□□□ 0.25
NEDD8-201ENST00000250495 C6orf183Q5T699 404 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 SYT6Q5T7P8 510 aaPredicted RBP16.59■□□□□ 0.25
NEDD8-201ENST00000250495 GLIPR1L1Q6UWM5 242 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 C18orf65Q6ZTR6 163 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 CDH26Q8IXH8 852 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 JAGN1Q8N5M9 183 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 Q8N9W7 124 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 OR8H1Q8NGG4 311 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 MUL1Q969V5 352 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 P2RX4Q99571 388 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 RASL11BQ9BPW5 248 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 ETAA1Q9NY74 926 aa16.59■□□□□ 0.25
NEDD8-201ENST00000250495 RCC2Q9P258 522 aaKnown RBP16.59■□□□□ 0.25
NEDD8-201ENST00000250495 MRPS28Q9Y2Q9 187 aaKnown RBP16.59■□□□□ 0.25
NEDD8-201ENST00000250495 TRAV8-7A0A075B6U6 113 aa16.58■□□□□ 0.24
NEDD8-201ENST00000250495 FSTP19883 344 aa16.58■□□□□ 0.24
NEDD8-201ENST00000250495 TRAT1Q6PIZ9 186 aa16.58■□□□□ 0.24
NEDD8-201ENST00000250495 SLC25A48Q6ZT89 311 aaKnown RBP16.58■□□□□ 0.24
NEDD8-201ENST00000250495 TMEM104Q8NE00 496 aa16.58■□□□□ 0.24
NEDD8-201ENST00000250495 PGLYRP3Q96LB9 341 aa16.58■□□□□ 0.24
NEDD8-201ENST00000250495 GNG12Q9UBI6 72 aa16.58■□□□□ 0.24
NEDD8-201ENST00000250495 C12orf77C9JDV5 145 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 CA11O75493 328 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 ALDH3B2P48448 385 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 GP2P55259 537 aaKnown RBP16.57■□□□□ 0.24
NEDD8-201ENST00000250495 TAS2R43P59537 309 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 GABARAPL2P60520 117 aa16.57■□□□□ 0.24
NEDD8-201ENST00000250495 DCTN2Q13561 401 aaKnown RBP16.57■□□□□ 0.24
NEDD8-201ENST00000250495 STEAP3Q658P3 488 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms