RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 RTN4RQ9BZR6 473 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 PLSCR4Q9NRQ2 329 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 C19orf53Q9UNZ5 99 aaPredicted RBP8.46□□□□□ -1.06
IRF1-201ENST00000245414 COL4A4P53420 1690 aaPredicted RBP8.46□□□□□ -1.06
IRF1-201ENST00000245414 TRAV26-1A0A087WT03 109 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 MDFIC2A0A1B0GVS7 189 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 FBLP22087 321 aaKnown RBP8.46□□□□□ -1.06
IRF1-201ENST00000245414 RAB9AP51151 201 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 METAP1P53582 386 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 HERV-K104P61576 105 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 SRPXP78539 464 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 PSG9Q00887 426 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 FAM53BQ14153 422 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 CNN3Q15417 329 aaKnown RBP8.46□□□□□ -1.06
IRF1-201ENST00000245414 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.46□□□□□ -1.06
IRF1-201ENST00000245414 TCTN1Q2MV58 587 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 LCN12Q6JVE5 192 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 VASH2Q86V25 355 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 ARHGEF39Q8N4T4 335 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 OR4N2Q8NGD1 307 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 ARRDC3Q96B67 414 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 FAM71F1Q96KD3 344 aaPredicted RBP8.46□□□□□ -1.06
IRF1-201ENST00000245414 HDHD3Q9BSH5 251 aaPredicted RBP8.46□□□□□ -1.06
IRF1-201ENST00000245414 CHRDL1Q9BU40 450 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 RNF114Q9Y508 228 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 OR1A2Q9Y585 309 aa8.46□□□□□ -1.06
IRF1-201ENST00000245414 IGKV1D-8A0A087WSZ0 117 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 SHISA7A6NL88 538 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 GUCA1AP43080 201 aaPredicted RBP8.45□□□□□ -1.06
IRF1-201ENST00000245414 LGALS7P47929 136 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 ZNF133P52736 654 aaPredicted RBP8.45□□□□□ -1.06
IRF1-201ENST00000245414 Q56UQ5 140 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 PRSS57Q6UWY2 283 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 OR1B1Q8NGR6 318 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 OR5B3Q8NH48 314 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 BADQ92934 168 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 ATP6V0BQ99437 205 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 FOXQ1Q9C009 403 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 IGHV2-26A0A0B4J1V2 119 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 TRAV1-1A0A0B4J248 108 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 CHST1O43916 411 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 EGR1P18146 543 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 MDH2P40926 338 aaKnown RBP8.45□□□□□ -1.06
IRF1-201ENST00000245414 ZNF83P51522 516 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 CRYBA4P53673 196 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 HLA-DRB5Q30154 266 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 TMEM25Q86YD3 366 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 PNKDQ8N490 385 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 VN1R2Q8NFZ6 395 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 ZNF519Q8TB69 540 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 CPT1CQ8TCG5 803 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 LRRC3BQ96PB8 259 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 LRFN3Q9BTN0 628 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 RAB11FIP5Q9BXF6 653 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.45□□□□□ -1.06
IRF1-201ENST00000245414 ATRXP46100 2492 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 VWA8A3KMH1 1905 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 K7EQS6 105 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 ESDP10768 282 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 AZU1P20160 251 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 IER3P46695 156 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 RRADP55042 308 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 QRFPP83859 136 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 C6orf201Q7Z4U5 140 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 SLC39A11Q8N1S5 342 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 TSTD1Q8NFU3 115 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 OR2AE1Q8NHA4 323 aa8.45□□□□□ -1.06
IRF1-201ENST00000245414 COA3Q9Y2R0 106 aaPredicted RBP8.45□□□□□ -1.06
IRF1-201ENST00000245414 TCF20Q9UGU0 1960 aaKnown RBP8.44□□□□□ -1.06
IRF1-201ENST00000245414 ADAM20O43506 726 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 SPINK4O60575 86 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 NUDT14O95848 222 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 GPX1P07203 203 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 CKS1BP61024 79 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 ZNF547Q8IVP9 402 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 FAM19A2Q8N3H0 131 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 ZNF439Q8NDP4 499 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 OR2M7Q8NG81 312 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 OR10P1Q8NGE3 313 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 SLC25A22Q9H936 323 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 ZNF816-ZNF321PA0A0X1KG74 233 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 BLACEA4D250 179 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 SNURFLB1AK76 121 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 TAX1BP3O14907 124 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 BGLAPP02818 100 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 C3orf79P0CE67 100 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 CYBAP13498 195 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 PLP1P60201 277 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 HTD2P86397 168 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 FAM71F2Q6NXP2 309 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 CCDC71LQ8N9Z2 235 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 OR51E1Q8TCB6 317 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 LIPHQ8WWY8 451 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 ERRFI1Q9UJM3 462 aaPredicted RBP8.44□□□□□ -1.06
IRF1-201ENST00000245414 PILRBQ9UKJ0 227 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 MCTS1Q9ULC4 181 aaKnown RBP8.44□□□□□ -1.06
IRF1-201ENST00000245414 ARL2-SNX15V9GYD0 113 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 TET1Q8NFU7 2136 aa8.44□□□□□ -1.06
IRF1-201ENST00000245414 MUC21A0A0G2JKD1 596 aa8.43□□□□□ -1.06
IRF1-201ENST00000245414 MUC21A0A140T8X8 626 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms