RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 SPINK2P20155 84 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 RNPS1Q15287 305 aaKnown RBP12.16□□□□□ -0.46
TARDBP-201ENST00000240185 ST6GALNAC3Q8NDV1 305 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 OR5R1Q8NH85 324 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 MYEOVQ96EZ4 313 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 ZNF665Q9H7R5 613 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 CLN8Q9UBY8 286 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 KCNK7Q9Y2U2 307 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 SERTM1A2A2V5 107 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 PTP4A3O75365 173 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 VSIG10L2P0DP72 767 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 VSIG8P0DPA2 414 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 PRSS8Q16651 343 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 CFDP00746 253 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-201ENST00000240185 IL4P05112 153 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 TMEM211Q6ICI0 200 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 TMEM91Q6ZNR0 172 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 HMGCLL1Q8TB92 370 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 TOX2Q96NM4 488 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 TMEM189A5PLL7 270 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 EPHA8P29322 1005 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-201ENST00000240185 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 PPP1R3EQ9H7J1 279 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 SNRPCP09234 159 aaKnown RBP12.15□□□□□ -0.46
TARDBP-201ENST00000240185 ZNF735P0CB33 412 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 SRIP30626 198 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 EFNB2P52799 333 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 IRF3Q14653 427 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 CBLN3Q6UW01 205 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 CXXC4Q9H2H0 198 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 TMEM30AQ9NV96 361 aa12.15□□□□□ -0.46
TARDBP-201ENST00000240185 TM4SF19Q96DZ7 209 aa12.15□□□□□ -0.47
TARDBP-201ENST00000240185 BEX4Q9NWD9 120 aaPredicted RBP12.15□□□□□ -0.47
TARDBP-201ENST00000240185 LOXL2Q9Y4K0 774 aa12.15□□□□□ -0.47
TARDBP-201ENST00000240185 PRICKLE4Q2TBC4 344 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 NIT1Q86X76 327 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 HIST1H2BAQ96A08 127 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 KCNE1BA0A087WTH5 132 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 C2orf83Q53S99 150 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 TMEM252Q8N6L7 170 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 ASB5Q8WWX0 329 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 FAM206AQ9NX38 181 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 PPIHO43447 177 aaKnown RBP12.14□□□□□ -0.47
TARDBP-201ENST00000240185 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 PGLYRP3Q96LB9 341 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 SLC26A1Q9H2B4 701 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 METTL1Q9UBP6 276 aaKnown RBP12.14□□□□□ -0.47
TARDBP-201ENST00000240185 PQLC2LA1A4F0 135 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 AGAP20933 346 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 MESTQ5EB52 335 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 RSPO2Q6UXX9 243 aaPredicted RBP12.14□□□□□ -0.47
TARDBP-201ENST00000240185 LINC00469Q8N7U9 141 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 HARBI1Q96MB7 349 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 DNAJC4Q9NNZ3 241 aa12.14□□□□□ -0.47
TARDBP-201ENST00000240185 A0A1W2PRD5 423 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 A0A1W2PRF3 423 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 A0A1W2PRM7 423 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 GZMHP20718 246 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 YBX1P67809 324 aaKnown RBP12.13□□□□□ -0.47
TARDBP-201ENST00000240185 IFITM2Q01629 132 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 KIAA1644Q3SXP7 199 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 NUP188Q5SRE5 1749 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 NDUFS8O00217 210 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
TARDBP-201ENST00000240185 CCR5P51681 352 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 DEFB109BQ30KR1 87 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 NUDT16L1Q9BRJ7 211 aaKnown RBP12.13□□□□□ -0.47
TARDBP-201ENST00000240185 PXMP4Q9Y6I8 212 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 OR2A4O95047 310 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 IZUMO4Q1ZYL8 232 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 ZBTB34Q8NCN2 500 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 OR2A7Q96R45 310 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 NPVFQ9HCQ7 196 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 GRIFINA4D1Z8 144 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 J3QR06 171 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 LDLRAD4O15165 306 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 SLC25A17O43808 307 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 JOSD1Q15040 202 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-201ENST00000240185 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 PMCHL2Q9BQD1 86 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 OPN3Q9H1Y3 402 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-201ENST00000240185 KLK13Q9UKR3 277 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 CCDC88AQ3V6T2 1871 aa12.13□□□□□ -0.47
TARDBP-201ENST00000240185 PHLPP1O60346 1717 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 TRAV39A0A0B4J263 110 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 AMY1AP04745 511 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 PIGYQ3MUY2 71 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 TMEM183AQ8IXX5 376 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 OR1L8Q8NGR8 309 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 FAM216AQ8WUB2 273 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 GSN-AS1Q9NRJ2 163 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 C7orf71A4D174 169 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 SYNGR1O43759 233 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 CDIPTO14735 213 aa12.12□□□□□ -0.47
TARDBP-201ENST00000240185 APELAP0DMC3 54 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms