RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 VHLLQ6RSH7 139 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF561Q8N587 486 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 OR5M8Q8NGP6 311 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 FYTTD1Q96QD9 318 aaKnown RBP11.06□□□□□ -0.64
SLIRP-201ENST00000238688 SMR3AQ99954 134 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 RSRP1Q9BUV0 290 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 SUCNR1Q9BXA5 334 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 GCM1Q9NP62 436 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 IL36RNQ9UBH0 155 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 DNAJB11Q9UBS4 358 aa11.06□□□□□ -0.64
SLIRP-201ENST00000238688 ABCA2Q9BZC7 2435 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 FAM172BPA6NC97 362 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 CRYM-AS1A6NIL9 109 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 DBX1A6NMT0 343 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 SDCBPO00560 298 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-201ENST00000238688 SPRY3O43610 288 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 PPYP01298 95 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 IFNA2P01563 188 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 CD8AP01732 235 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 GZMHP20718 246 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 DUSP1P28562 367 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 PRDX2P32119 198 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 HMGN3Q15651 99 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 CR1LQ2VPA4 569 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 ABCA11PQ4W5N1 156 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 ARFGEF3Q5TH69 2177 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 CMTM1Q8IZ96 169 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 LRRC75A-AS1Q8N1F1 130 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 GCSAMQ8N6F7 178 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 LRTM2Q8N967 370 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 OR10J5Q8NHC4 309 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 ITLN1Q8WWA0 313 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 SDSLQ96GA7 329 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 RTBDNQ9BSG5 229 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-201ENST00000238688 BEX2Q9BXY8 128 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 UBTD1Q9HAC8 227 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 BEX1Q9HBH7 125 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 UFSP2Q9NUQ7 469 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF581Q9P0T4 197 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 TRAPPC2LQ9UL33 140 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 PPP1R3CQ9UQK1 317 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 DSCAML1Q8TD84 2053 aa11.05□□□□□ -0.64
SLIRP-201ENST00000238688 TRAV38-1A0A0B4J264 116 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 DUXBA0A1W2PPF3 345 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 RFPL4AA6NLU0 287 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 HMSDA8MTL9 139 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 RFPL4AL1F8VTS6 287 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 SIRPB1O00241 398 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 NDUFA2O43678 99 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF737O75373 536 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 PSG2P11465 335 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 AKR1C4P17516 323 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 CXCL3P19876 107 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 VAMP1P23763 118 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 RBMXP38159 391 aaKnown RBP11.04□□□□□ -0.64
SLIRP-201ENST00000238688 PPOXP50336 477 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 KRTAP21-3Q3LHN1 58 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 ESCO2Q56NI9 601 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 MOGAT3Q86VF5 341 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 CIARTQ8N365 385 aaPredicted RBP11.04□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF565Q8N9K5 539 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 ZBTB34Q8NCN2 500 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 OR2T35Q8NGX2 323 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 CAPSLQ8WWF8 208 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 MAFIPQ8WZ33 124 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 AKR1E2Q96JD6 320 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 SAP30LQ9HAJ7 183 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 OR2W1Q9Y3N9 320 aa11.04□□□□□ -0.64
SLIRP-201ENST00000238688 CR1P17927 2039 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.03□□□□□ -0.64
SLIRP-201ENST00000238688 K7N7A8 449 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 GPR31O00270 319 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 RPS2P15880 293 aaKnown RBP11.03□□□□□ -0.64
SLIRP-201ENST00000238688 OR3A1P47881 315 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 SNRPD2P62316 118 aaKnown RBP11.03□□□□□ -0.64
SLIRP-201ENST00000238688 MRPS11P82912 194 aaKnown RBP11.03□□□□□ -0.64
SLIRP-201ENST00000238688 ZNF672Q499Z4 452 aaPredicted RBP11.03□□□□□ -0.64
SLIRP-201ENST00000238688 Q5PR19 223 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 BRICD5Q6PL45 260 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 C20orf204Q6ZNR8 217 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 H1FOOQ8IZA3 346 aaPredicted RBP11.03□□□□□ -0.64
SLIRP-201ENST00000238688 OR52B4Q8NGK2 314 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 ANGPTL6Q8NI99 470 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 DYRK2Q92630 601 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 TMEM230Q96A57 120 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 GALMQ96C23 342 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 C18orf12Q96KH6 178 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 GON7Q9BXV9 100 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 NMES1Q9C002 83 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 FXYD6Q9H0Q3 95 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 NAA60Q9H7X0 242 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 DYNLRB1Q9NP97 96 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 ZFP57Q9NU63 452 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 OR6C3Q9NZP0 311 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 LPAR3Q9UBY5 353 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 OR14J1Q9UGF5 321 aa11.03□□□□□ -0.64
SLIRP-201ENST00000238688 ABCA1O95477 2261 aa11.02□□□□□ -0.64
SLIRP-201ENST00000238688 TEX13DA0A0J9YY54 714 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms