RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SELLP14151 372 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 IGFBP2P18065 325 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 EDDM3AQ14507 147 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 ABCA11PQ4W5N1 156 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 PHLDA2Q53GA4 152 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 KCTD9Q7L273 389 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 LDLRAD3Q86YD5 345 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 OR11H4Q8NGC9 324 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 OR1L1Q8NH94 360 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 RTN4IP1Q8WWV3 396 aaPredicted RBP12.68□□□□□ -0.38
HDHD3-201ENST00000238379 HYLS1Q96M11 299 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 CCL13Q99616 98 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 RANBP3Q9H6Z4 567 aaPredicted RBP12.68□□□□□ -0.38
HDHD3-201ENST00000238379 PRR13Q9NZ81 148 aa12.68□□□□□ -0.38
HDHD3-201ENST00000238379 TEX13DA0A0J9YY54 714 aaPredicted RBP12.67□□□□□ -0.38
HDHD3-201ENST00000238379 A0A1B0GW55 424 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 ODAMA1E959 279 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 IFNA2P01563 188 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 HBZP02008 142 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 PPOXP50336 477 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 P2RX3P56373 397 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 CR1LQ2VPA4 569 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 C6orf183Q5T699 404 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DUX4L9Q6RFH8 374 aaPredicted RBP12.67□□□□□ -0.38
HDHD3-201ENST00000238379 OR5D13Q8NGL4 314 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 SECTM1Q8WVN6 248 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 GALMQ96C23 342 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DCTN5Q9BTE1 182 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 SLC5A7Q9GZV3 580 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 ZNF665Q9H7R5 613 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 HRNRQ86YZ3 2850 aaPredicted RBP12.67□□□□□ -0.38
HDHD3-201ENST00000238379 PPIAL4EA0A075B759 164 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 TRAV38-1A0A0B4J264 116 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 IGHV1-69-2A0A0G2JMI3 117 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 PPIAL4DF5H284 164 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 CCSO14618 274 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 SIGLEC5O15389 551 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 PPIAL4FP0DN26 164 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 SRSF4Q08170 494 aaKnown RBP12.67□□□□□ -0.38
HDHD3-201ENST00000238379 ZNF843Q8N446 348 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 ZNF565Q8N9K5 539 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 COQ8AQ8NI60 647 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 ASB13Q8WXK3 278 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 GALNT14Q96FL9 552 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 VRK1Q99986 396 aaPredicted RBP12.67□□□□□ -0.38
HDHD3-201ENST00000238379 NCOR1P1Q9H4R4 102 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 NAA60Q9H7X0 242 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 CCL28Q9NRJ3 127 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 PPIAL4AQ9Y536 164 aa12.67□□□□□ -0.38
HDHD3-201ENST00000238379 FLNCQ14315 2725 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 A0A1W2PPR1 153 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 C15orf65H3BRN8 121 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 HSPA12AO43301 675 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 CD8AP01732 235 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 DNASE1P24855 282 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 IL2RGP31785 369 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 SSTR5P35346 364 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 CEACAM6P40199 344 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 TRAT1Q6PIZ9 186 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 ZNF818PQ6ZRF7 136 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 FAM216BQ8N7L0 139 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 PARP12Q9H0J9 701 aaKnown RBP12.66□□□□□ -0.38
HDHD3-201ENST00000238379 FAM234AQ9H0X4 552 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 CBLN4Q9NTU7 201 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 RDH8Q9NYR8 311 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 KCNIP3Q9Y2W7 256 aa12.66□□□□□ -0.38
HDHD3-201ENST00000238379 ZNF462Q96JM2 2506 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 MEX3AA1L020 520 aaKnown RBP12.65□□□□□ -0.38
HDHD3-201ENST00000238379 GPR31O00270 319 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 TNFRSF13BO14836 293 aaPredicted RBP12.65□□□□□ -0.38
HDHD3-201ENST00000238379 GZMHP20718 246 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 RND3P61587 244 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 LAMTOR1Q6IAA8 161 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 C11orf71Q6IPW1 123 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 FAM185AQ8N0U4 392 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 CCDC71LQ8N9Z2 235 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 ARL11Q969Q4 196 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 TOLLIPQ9H0E2 274 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 DNTTIP1Q9H147 329 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 RAB18Q9NP72 206 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 TANC2Q9HCD6 1990 aa12.65□□□□□ -0.38
HDHD3-201ENST00000238379 RAI1Q7Z5J4 1906 aaPredicted RBP12.65□□□□□ -0.38
HDHD3-201ENST00000238379 MPPED1O15442 326 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 C1QL1O75973 258 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 OR5AC1P0C628 307 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 DANCRP0C864 163 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 EDDM3BP56851 147 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 TMEM187Q14656 261 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 SP6Q3SY56 376 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 FAM53AQ6NSI3 398 aaPredicted RBP12.65□□□□□ -0.39
HDHD3-201ENST00000238379 OR52L2PQ8NGH6 319 aa12.65□□□□□ -0.39
HDHD3-201ENST00000238379 OR10V1Q8NGI7 309 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms