RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PROB1E7EW31 1015 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 SIRPB1O00241 398 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 NXPH2O95156 264 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 MPV17P39210 176 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 ZNF266Q14584 549 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 OR8G1Q15617 311 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 HMGN3Q15651 99 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 ACSF3Q4G176 576 aaPredicted RBP13.67□□□□□ -0.22
UBE3D-201ENST00000237186 DHRS7BQ6IAN0 325 aaPredicted RBP13.67□□□□□ -0.22
UBE3D-201ENST00000237186 VWA1Q6PCB0 445 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 TMEM252Q8N6L7 170 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 OBP2BQ9NPH6 170 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 TAAR3PQ9P1P4 343 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 OR1A1Q9P1Q5 309 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 RNF115Q9Y4L5 304 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 DOCK7Q96N67 2140 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 IGSF23A1L1A6 192 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 TOR1AO14656 332 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 IGLV1-44P01699 117 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 KITLGP21583 273 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 HOXC12P31275 282 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 BAXQ07812 192 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 MED12LQ86YW9 2145 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 C11orf53Q8IXP5 236 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 C1orf174Q8IYL3 243 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 FAM169BQ8N8A8 192 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 LSM10Q969L4 123 aaKnown RBP13.67□□□□□ -0.22
UBE3D-201ENST00000237186 TRAPPC2LQ9UL33 140 aa13.67□□□□□ -0.22
UBE3D-201ENST00000237186 DMXL1Q9Y485 3027 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.66□□□□□ -0.22
UBE3D-201ENST00000237186 A0A1B0GWJ7 208 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 H0YL77 283 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 TNFSF12O43508 249 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 OR8U9P0C7N5 309 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 FIP1L1Q6UN15 594 aaKnown RBP13.66□□□□□ -0.22
UBE3D-201ENST00000237186 ODF3L1Q8IXM7 274 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 OR8U1Q8NH10 309 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 IL1F10Q8WWZ1 152 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 SCRT1Q9BWW7 348 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 DKK4Q9UBT3 224 aa13.66□□□□□ -0.22
UBE3D-201ENST00000237186 ZNF891A8MT65 544 aaPredicted RBP13.65□□□□□ -0.22
UBE3D-201ENST00000237186 KIAA1324LA8MWY0 1029 aaPredicted RBP13.65□□□□□ -0.22
UBE3D-201ENST00000237186 MLNRO43193 412 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 SSSCA1O60232 199 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 TMEM50AO95807 157 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 TSPAN15O95858 294 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 HAND1O96004 215 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 CGAP01215 116 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 SERPINE2P07093 398 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 SNCAP37840 140 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 ID4P47928 161 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 VAMP2P63027 116 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 DEFB109BQ30KR1 87 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 MIDNQ504T8 468 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 GPR146Q96CH1 333 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 BCL2L14Q9BZR8 327 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 CXXC4Q9H2H0 198 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 CHST1O43916 411 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 WDR1O75083 606 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 TNFSF13O75888 250 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 GRPP07492 148 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 SFTA3P0C7M3 94 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 PSG2P11465 335 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 CD80P33681 288 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 CD200P41217 278 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 PAX9P55771 341 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 FOXF2Q12947 444 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 P2RY6Q15077 328 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 IGFL3Q6UXB1 125 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 PRR7Q8TB68 274 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 TMEM171Q8WVE6 324 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 SH3BGRL3Q9H299 93 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 ZNF71Q9NQZ8 489 aaPredicted RBP13.65□□□□□ -0.22
UBE3D-201ENST00000237186 C19orf12Q9NSK7 152 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 TINAGQ9UJW2 476 aa13.65□□□□□ -0.22
UBE3D-201ENST00000237186 PTPRBP23467 1997 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 A0A0G2JRQ6 117 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 C9JQL5 133 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 K7N7A8 449 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 AGFG2O95081 481 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 CAMLGP49069 296 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 HSD17B11Q8NBQ5 300 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 STARD4Q96DR4 205 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 TAAR6Q96RI8 345 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 TOLLIPQ9H0E2 274 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 MAGT1Q9H0U3 335 aa13.64□□□□□ -0.23
UBE3D-201ENST00000237186 TMEM30CPA0ZSE6 113 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 UMAD1C9J7I0 102 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 AGPAT2O15120 278 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 CECR9P0C854 216 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
UBE3D-201ENST00000237186 SLC35E4Q6ICL7 350 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 SNIP1Q8TAD8 396 aaKnown RBP13.63□□□□□ -0.23
UBE3D-201ENST00000237186 CACNA1GO43497 2377 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 TRAV39A0A0B4J263 110 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 A0A1B0GW64 132 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 MBD3L4A6NDZ8 208 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-201ENST00000237186 MBD3L3A6NE82 208 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-201ENST00000237186 MBD3L5A6NJ08 208 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-201ENST00000237186 HSPA12AO43301 675 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms