RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 GFRA1P56159 465 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 SERF2P84101 59 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 TLE1Q04724 770 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 FAM57BQ71RH2 274 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 UBALD2Q8IYN6 164 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 CMTM8Q8IZV2 173 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 RAB42Q8N4Z0 105 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 ZNF721Q8TF20 911 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 OTX1P32242 354 aaPredicted RBP11.19□□□□□ -0.62
MSH2-201ENST00000233146 MPV17L2Q567V2 206 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 WBP2NLQ6ICG8 309 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 OR10W1Q8NGF6 305 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 OR4F5Q8NH21 305 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 OR1E3Q8WZA6 343 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 ATP6V0BQ99437 205 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 SPIN2AQ99865 258 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 SPIN2BQ9BPZ2 258 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 PHF3Q92576 2039 aaKnown RBP11.18□□□□□ -0.62
MSH2-201ENST00000233146 CHST1O43916 411 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 TESK1Q15569 626 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 OR1B1Q8NGR6 318 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 DAPP1Q9UN19 280 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 POLR1DQ9Y2S0 133 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 ZNF205O95201 554 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 POU2F2P09086 479 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 STAG3L3P0CL85 134 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 ZNF20P17024 532 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 AMTP48728 403 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 ZNF133P52736 654 aaPredicted RBP11.18□□□□□ -0.62
MSH2-201ENST00000233146 FXYD4P59646 89 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 PMCHL1Q16048 86 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 KRTCAP3Q53RY4 240 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 VN1R4Q7Z5H5 301 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 SCGB1C1Q8TD33 95 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
MSH2-201ENST00000233146 NECAP2Q9NVZ3 263 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 DOCK11Q5JSL3 2073 aa11.18□□□□□ -0.62
MSH2-201ENST00000233146 C11orf98E9PRG8 122 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 GDF1P27539 372 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 RPL27P61353 136 aaKnown RBP11.17□□□□□ -0.62
MSH2-201ENST00000233146 HAPLN4Q86UW8 402 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 C5orf17Q8NAS9 161 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 OR4P4Q8NGL7 312 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 SSC4DQ8WTU2 575 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 PBOV1Q9GZY1 135 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 COA3Q9Y2R0 106 aaPredicted RBP11.17□□□□□ -0.62
MSH2-201ENST00000233146 TRAV9-2A0A087WT02 112 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 TRAV8-6A0A0B4J262 113 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 MLF2Q15773 248 aaPredicted RBP11.17□□□□□ -0.62
MSH2-201ENST00000233146 ACKR1Q16570 336 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 STUMQ69YW2 141 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 DEFB128Q7Z7B8 93 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 OR2Y1Q8NGV0 311 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 NUS1Q96E22 293 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 KLHDC7BQ96G42 594 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 RTN4RQ9BZR6 473 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 GNB4Q9HAV0 340 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 SLC39A9Q9NUM3 307 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 TMEM38BQ9NVV0 291 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
MSH2-201ENST00000233146 MYOFQ9NZM1 2061 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 COL4A2P08572 1712 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 A0A1W2PS18 150 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 C17orf112F2Z3M2 114 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 UCP1P25874 307 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 GPR6P46095 362 aaPredicted RBP11.17□□□□□ -0.62
MSH2-201ENST00000233146 PSG4Q00888 419 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 HIST3H3Q16695 136 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 BVES-AS1Q5T3Y7 98 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 LINC00346Q8IVM7 164 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 SELENOHQ8IZQ5 122 aaKnown RBP11.17□□□□□ -0.62
MSH2-201ENST00000233146 SHISA5Q8N114 240 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 OR5P3Q8WZ94 311 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 NEUROG1Q92886 237 aa11.17□□□□□ -0.62
MSH2-201ENST00000233146 LSM7Q9UK45 103 aaKnown RBP11.17□□□□□ -0.62
MSH2-201ENST00000233146 LOC102725191A0A1B0GVB3 256 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 ZNF850A8MQ14 1090 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 IFI6P09912 130 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 NPPCP23582 126 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 OR4C3Q8NH37 302 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 NEIL1Q96FI4 390 aaPredicted RBP11.16□□□□□ -0.62
MSH2-201ENST00000233146 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 ABI3Q9P2A4 366 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 PTRH2Q9Y3E5 179 aaKnown RBP11.16□□□□□ -0.62
MSH2-201ENST00000233146 TMPRSS2O15393 492 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 S1PR2O95136 353 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 EOMESO95936 686 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 ADH1BP00325 375 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 C6orf201Q7Z4U5 140 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 C1QL2Q7Z5L3 287 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 CCDC71LQ8N9Z2 235 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 GPER1Q99527 375 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 RAB11FIP5Q9BXF6 653 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 CENPMQ9NSP4 180 aa11.16□□□□□ -0.62
MSH2-201ENST00000233146 C3orf85A0A1B0GTC6 90 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 SIRPB1O00241 398 aa11.15□□□□□ -0.62
MSH2-201ENST00000233146 ADAM20O43506 726 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms