RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OR1L1Q8NH94 360 aa10.23□□□□□ -0.77
LSM5-201ENST00000223084 MRPL30Q8TCC3 161 aaKnown RBP10.23□□□□□ -0.77
LSM5-201ENST00000223084 URM1Q9BTM9 101 aaKnown RBP10.23□□□□□ -0.77
LSM5-201ENST00000223084 ZNF696Q9H7X3 374 aa10.23□□□□□ -0.77
LSM5-201ENST00000223084 PLEKHJ1Q9NW61 149 aa10.23□□□□□ -0.77
LSM5-201ENST00000223084 DPM3Q9P2X0 92 aa10.23□□□□□ -0.77
LSM5-201ENST00000223084 PSG11Q9UQ72 335 aa10.23□□□□□ -0.77
LSM5-201ENST00000223084 FOXI3A8MTJ6 420 aaPredicted RBP10.22□□□□□ -0.77
LSM5-201ENST00000223084 VGLL3A8MV65 326 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 BUB1B-PAK6H3BSN5 160 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 H3BUI4 141 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 J3QR06 171 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 SDCBPO00560 298 aaPredicted RBP10.22□□□□□ -0.77
LSM5-201ENST00000223084 ORC5O43913 435 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 CA11O75493 328 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 HBZP02008 142 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 CFPP27918 469 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 SDC2P34741 201 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 TGFBR1P36897 503 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 TMEM50BP56557 158 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 AANATQ16613 207 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 DHRS7BQ6IAN0 325 aaPredicted RBP10.22□□□□□ -0.77
LSM5-201ENST00000223084 CCBE1Q6UXH8 406 aaPredicted RBP10.22□□□□□ -0.77
LSM5-201ENST00000223084 FAM89BQ8N5H3 189 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 OR10A7Q8NGE5 316 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 CENPOQ9BU64 300 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 MMP28Q9H239 520 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 LIN7BQ9HAP6 207 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 ABCB10Q9NRK6 738 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 FBLN5Q9UBX5 448 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 RAB22AQ9UL26 194 aa10.22□□□□□ -0.77
LSM5-201ENST00000223084 NOTOA8MTQ0 251 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 LEUTXA8MZ59 168 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 LY6LH3BQJ8 138 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 F2RL2O00254 374 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 CHST1O43916 411 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 NDUFA7O95182 113 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 CD24P25063 80 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 LOXL3P58215 753 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 MXD1Q05195 221 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 DIAPH2-AS1Q14236 149 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 MOGAT2Q3SYC2 334 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 C6orf183Q5T699 404 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 TPTE2P1Q5T6R2 138 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 Q6ZPA2 131 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 Q6ZSV7 163 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 TMEM219Q86XT9 240 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 OR10V1Q8NGI7 309 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 OR4F5Q8NH21 305 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 YIPF6Q96EC8 236 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 ARHGAP5-AS1Q96IT6 56 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 KCTD7Q96MP8 289 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 HDHD3Q9BSH5 251 aaPredicted RBP10.21□□□□□ -0.77
LSM5-201ENST00000223084 TAF9BQ9HBM6 251 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 MBNL3Q9NUK0 354 aaKnown RBP10.21□□□□□ -0.77
LSM5-201ENST00000223084 GFOD1Q9NXC2 390 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 AK3Q9UIJ7 227 aa10.21□□□□□ -0.77
LSM5-201ENST00000223084 A6NDX4 124 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 SLC31A2O15432 143 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 SPINT2O43291 252 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 RPL15P61313 204 aaKnown RBP10.2□□□□□ -0.78
LSM5-201ENST00000223084 FBLN7Q53RD9 439 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 PLAC9Q5JTB6 97 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 OLFML2AQ68BL7 652 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 Q6ZTK2 550 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 TPRA1Q86W33 373 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 OR52L2PQ8NGH6 319 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 OR52M1Q8NGK5 317 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 SETD6Q8TBK2 473 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 PECRQ9BY49 303 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 CHMP1AQ9HD42 196 aaPredicted RBP10.2□□□□□ -0.78
LSM5-201ENST00000223084 VCX3AQ9NNX9 186 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 KCNIP1Q9NZI2 227 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 DAPK2Q9UIK4 370 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 TCF19Q9Y242 345 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 ANK2Q01484 3957 aa10.2□□□□□ -0.78
LSM5-201ENST00000223084 TRIM64CA6NLI5 447 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 NAPSAO96009 420 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 SMIM18P0DKX4 95 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 SNRPBP14678 240 aaKnown RBP10.19□□□□□ -0.78
LSM5-201ENST00000223084 CEACAM3P40198 252 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 RANBP1P43487 201 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 DYNLT3P51808 116 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 LSM3P62310 102 aaKnown RBP10.19□□□□□ -0.78
LSM5-201ENST00000223084 GNMTQ14749 295 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 SFXN4Q6P4A7 337 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 TRAT1Q6PIZ9 186 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 SLC16A12Q6ZSM3 486 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 OR56B1Q8NGI3 324 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 OR10X1Q8NGY0 326 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 LINC01006Q8NI28 216 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 TOMM40LQ969M1 308 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 RPEQ96AT9 228 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 CREB3L1Q96BA8 519 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 BEX1Q9HBH7 125 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 OR2S2Q9NQN1 319 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 GNG12Q9UBI6 72 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 HSF4Q9ULV5 492 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 KCNK7Q9Y2U2 307 aa10.19□□□□□ -0.78
LSM5-201ENST00000223084 SIGLEC9Q9Y336 463 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms