RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 A0A1W2PPE2 198 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 SNCAP37840 140 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 TESK1Q15569 626 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 IGFBP7Q16270 282 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 TMEM42Q69YG0 159 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 ZNF561Q8N587 486 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 SSC4DQ8WTU2 575 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 DLL3Q9NYJ7 618 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 REV3LO60673 3130 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 IGKV1D-13A0A0B4J2D9 117 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 MT-ND4LP03901 98 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 IGKV1-13P0DP09 117 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 ZNF787Q6DD87 383 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 DHRS7BQ6IAN0 325 aaPredicted RBP12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 Q8IYB0 196 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 BOD1Q96IK1 185 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 ADGRG7Q96K78 797 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 RAB40CQ96S21 281 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 CLEC18AA5D8T8 446 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 PRSS44E7EML9 344 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 PGLYRP1O75594 196 aaPredicted RBP12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 OR3A1P47881 315 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 SOX8P57073 446 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 BAXQ07812 192 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 BTNL8Q6UX41 500 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 CLEC18CQ8NCF0 446 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 GALMQ96C23 342 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 RHBDL1O75783 438 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 SPEM2Q0P670 501 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 C15orf54Q8N8G6 183 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 SLC25A40Q8TBP6 338 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 HPSE2Q8WWQ2 592 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 PQLC2LA1A4F0 135 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 IGSF23A1L1A6 192 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 PMELP40967 661 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 TLE1Q04724 770 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 KIAA0141Q14154 515 aaPredicted RBP12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 WFDC1Q9HC57 220 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 SH2D2AQ9NP31 389 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 ATPIF1Q9UII2 106 aa12.8□□□□□ -0.36
UBE2D4-201ENST00000222402 SYNGR2O43760 224 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 SULT1A1P50225 295 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 IL24Q13007 206 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 C18orf12Q96KH6 178 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 OR1A1Q9P1Q5 309 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 LAMA1P25391 3075 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 M0R296 226 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 COX5BP10606 129 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 LYL1P12980 280 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 NQO2P16083 231 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 EDDM3BP56851 147 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 ZNF429Q86V71 674 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 DMBX1Q8NFW5 382 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 OR1K1Q8NGR3 316 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 SDSLQ96GA7 329 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 MRPS18CQ9Y3D5 142 aaKnown RBP12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 UBE2L5PA0A1B0GUS4 154 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 BTBD17A6NE02 478 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 PITX3O75364 302 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 SELENOVP59797 346 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 SAXO1Q8IYX7 474 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 ATP5SQ99766 215 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 RARRES2Q99969 163 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 HMGB3O15347 200 aaKnown RBP12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 AGFG2O95081 481 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 FGF8P55075 233 aaPredicted RBP12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 MST1LQ2TV78 715 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 SSX9Q7RTT3 188 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 H2BFWTQ7Z2G1 175 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 LHX4Q969G2 390 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 ADAMTS9Q9P2N4 1935 aa12.79□□□□□ -0.36
UBE2D4-201ENST00000222402 PCNX2A6NKB5 2137 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 MED13Q9UHV7 2174 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 TMEM30CPA0ZSE6 113 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 FOXI3A8MTJ6 420 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 DEFB108AA8MXU0 73 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 H0Y980 276 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 SELEP16581 610 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 NDUFA6P56556 154 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 ALKBH6Q3KRA9 238 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 OR5P3Q8WZ94 311 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 POM121L2Q96KW2 1035 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 OR2D2Q9H210 308 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 LYRM2Q9NU23 88 aaPredicted RBP12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 HEXAP06865 529 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 ZNF528Q3MIS6 628 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 NRN1LQ496H8 165 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 GINS3Q9BRX5 216 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 NIT2Q9NQR4 276 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 CADP27708 2225 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 OR2H2O95918 312 aa12.78□□□□□ -0.36
UBE2D4-201ENST00000222402 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms