RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 MED19A0JLT2 244 aaPredicted RBP16.47■□□□□ 0.23
SMPD3-201ENST00000219334 LNP1A1A4G5 178 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 HPXP02790 462 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 G0S2P27469 103 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 RPL27AP46776 148 aaKnown RBP16.47■□□□□ 0.23
SMPD3-201ENST00000219334 EIF4EBP2Q13542 120 aaPredicted RBP16.47■□□□□ 0.23
SMPD3-201ENST00000219334 TRAV8-7A0A075B6U6 113 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 A0A1B0GU03 582 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 ASAH2BP0C7U1 165 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 COX6A1P12074 109 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 WASHC3Q9Y3C0 194 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 TRIOBPQ9H2D6 2365 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 SHANK3Q9BYB0 1731 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 P01737 135 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 TPRX1Q8N7U7 411 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 MS4A3Q96HJ5 214 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 PTP4A3O75365 173 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 TTRP02766 147 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 MPV17P39210 176 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 IL19Q9UHD0 177 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 PRSS23O95084 383 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 ERGP11308 486 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 GFRA1P56159 465 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 ZNF154Q13106 437 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 TMEM116Q8NCL8 245 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 CEP290O15078 2479 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 AHCTF1Q8WYP5 2266 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 B2MP61769 119 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 RANP62826 216 aaKnown RBP16.46■□□□□ 0.23
SMPD3-201ENST00000219334 TEPPQ6URK8 271 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 DYRK2Q92630 601 aa16.46■□□□□ 0.23
SMPD3-201ENST00000219334 SMPD2O60906 423 aa16.46■□□□□ 0.22
SMPD3-201ENST00000219334 CDS2O95674 445 aa16.46■□□□□ 0.22
SMPD3-201ENST00000219334 HPRT1P00492 218 aa16.46■□□□□ 0.22
SMPD3-201ENST00000219334 PDLIM4P50479 330 aa16.46■□□□□ 0.22
SMPD3-201ENST00000219334 AANATQ16613 207 aa16.46■□□□□ 0.22
SMPD3-201ENST00000219334 CALHM1Q8IU99 346 aa16.46■□□□□ 0.22
SMPD3-201ENST00000219334 OR1K1Q8NGR3 316 aa16.46■□□□□ 0.22
SMPD3-201ENST00000219334 SEC11CQ9BY50 192 aa16.46■□□□□ 0.22
SMPD3-201ENST00000219334 FOXD3Q9UJU5 478 aaPredicted RBP16.46■□□□□ 0.22
SMPD3-201ENST00000219334 IGHV3-21A0A0B4J1V1 117 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 IL11P20809 199 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 INPP5JQ15735 1006 aaPredicted RBP16.45■□□□□ 0.22
SMPD3-201ENST00000219334 EBLN2Q6P2I7 272 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 FDX2Q6P4F2 183 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 PRR13Q9NZ81 148 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 PSG2P11465 335 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 CEACAM1P13688 526 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 SULT1A1P50225 295 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 ROM1Q03395 351 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 AUP1Q9Y679 476 aa16.45■□□□□ 0.22
SMPD3-201ENST00000219334 SCN3AQ9NY46 2000 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 ADAM11O75078 769 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 KLF9Q13886 244 aaPredicted RBP16.44■□□□□ 0.22
SMPD3-201ENST00000219334 TMEM97Q5BJF2 176 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 PHYHIPLQ96FC7 376 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 SNX22Q96L94 193 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 MIOXQ9UGB7 285 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 NUP214P35658 2090 aaPredicted RBP16.44■□□□□ 0.22
SMPD3-201ENST00000219334 DUXBA0A1W2PPF3 345 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 C11orf94C9JXX5 98 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 RIGQ13278 110 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 BVESQ8NE79 360 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 MRPL24Q96A35 216 aaKnown RBP16.44■□□□□ 0.22
SMPD3-201ENST00000219334 LOC101059948A0A1B0GTJ6 334 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 MOGAT2Q3SYC2 334 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 SEZ6L2Q6UXD5 910 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 C16orf82Q7Z2V1 217 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 HIGD1AQ9Y241 93 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 TRIP12Q14669 1992 aaPredicted RBP16.44■□□□□ 0.22
SMPD3-201ENST00000219334 A0A1W2PS18 150 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 GREM1O60565 184 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 PRSS1P07477 247 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 ZNF883P0CG24 379 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 KIR2DL2P43627 348 aaPredicted RBP16.44■□□□□ 0.22
SMPD3-201ENST00000219334 KIR3DL2P43630 455 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 CLLU1Q5K131 121 aa16.44■□□□□ 0.22
SMPD3-201ENST00000219334 SNRNP40Q96DI7 357 aaKnown RBP16.44■□□□□ 0.22
SMPD3-201ENST00000219334 ARID1AO14497 2285 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 A0A1W2PR77 199 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 MGPP08493 103 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 RPL7P18124 248 aaKnown RBP16.43■□□□□ 0.22
SMPD3-201ENST00000219334 FGF12P61328 243 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 OR8G5Q8NG78 346 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 A0A1W2PNV4 684 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 NKX2-6A6NCS4 301 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 LEUTXA8MZ59 168 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 PGA4P0DJD7 388 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 CCL19Q99731 98 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 MARVELD1Q9BSK0 173 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 PRDM14Q9GZV8 571 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 SRD5A3Q9H8P0 318 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 FOXJ2Q9P0K8 574 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 IGHV3-72A0A0B4J1Y9 119 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 HAX1O00165 279 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 FAM157CP0CG43 387 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 KHDC3LQ587J8 217 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 EIF4E3Q8N5X7 224 aaKnown RBP16.43■□□□□ 0.22
SMPD3-201ENST00000219334 HBZP02008 142 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 USF1P22415 310 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms