RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 GNG3P63215 75 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 PLP2Q04941 152 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 TIPARPQ7Z3E1 657 aaKnown RBP11.34□□□□□ -0.59
SRP54-201ENST00000216774 FAM58AQ8N1B3 248 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 APH1AQ96BI3 265 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 GPR146Q96CH1 333 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 ZPBPQ9BS86 351 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 PKIBQ9C010 78 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 A0A0G2JRQ6 117 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 LINC00587B1AMM8 73 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 B4DEV8 164 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 NXPH3O95157 252 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 F10P00742 488 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
SRP54-201ENST00000216774 ELOBQ15370 118 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 ZNF295-AS1Q8N0V1 137 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 RNF150Q9ULK6 438 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 LOXL2Q9Y4K0 774 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 LOC102723971A0A1B0GUV8 181 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 NEURL1O76050 574 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 HOXA5P20719 270 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 CEBPGP53567 150 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 FOXG1P55316 489 aaPredicted RBP11.33□□□□□ -0.6
SRP54-201ENST00000216774 MOB1BQ7L9L4 216 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 THNSL2Q86YJ6 484 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 OR51H1Q8NH63 302 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 THOC3Q96J01 351 aaKnown RBP11.33□□□□□ -0.6
SRP54-201ENST00000216774 ERRFI1Q9UJM3 462 aaPredicted RBP11.33□□□□□ -0.6
SRP54-201ENST00000216774 MMP24Q9Y5R2 645 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 PCSK5Q92824 1860 aa11.33□□□□□ -0.6
SRP54-201ENST00000216774 ZNF727A8MUV8 499 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
SRP54-201ENST00000216774 HS3ST1O14792 307 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 PSG2P11465 335 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 ACP1P24666 158 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 MDH2P40926 338 aaKnown RBP11.32□□□□□ -0.6
SRP54-201ENST00000216774 GLIPR1P48060 266 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 ACSF3Q4G176 576 aaPredicted RBP11.32□□□□□ -0.6
SRP54-201ENST00000216774 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 OR10V1Q8NGI7 309 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 Q8WTZ3 238 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 RDH5Q92781 318 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
SRP54-201ENST00000216774 DLL3Q9NYJ7 618 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 TREM2Q9NZC2 230 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.32□□□□□ -0.6
SRP54-201ENST00000216774 CELA3AP09093 270 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 RNASE11Q8TAA1 199 aaKnown RBP11.32□□□□□ -0.6
SRP54-201ENST00000216774 SCGB1C1Q8TD33 95 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 ZNF488Q96MN9 340 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 MIOXQ9UGB7 285 aa11.32□□□□□ -0.6
SRP54-201ENST00000216774 ZNHIT1O43257 154 aa11.31□□□□□ -0.6
SRP54-201ENST00000216774 SYNGR2O43760 224 aa11.31□□□□□ -0.6
SRP54-201ENST00000216774 FBP1P09467 338 aa11.31□□□□□ -0.6
SRP54-201ENST00000216774 CDX1P47902 265 aaPredicted RBP11.31□□□□□ -0.6
SRP54-201ENST00000216774 TMEM267Q0VDI3 215 aaPredicted RBP11.31□□□□□ -0.6
SRP54-201ENST00000216774 ABHD17BQ5VST6 288 aa11.31□□□□□ -0.6
SRP54-201ENST00000216774 TOLLIPQ9H0E2 274 aa11.31□□□□□ -0.6
SRP54-201ENST00000216774 OR51I2Q9H344 312 aa11.31□□□□□ -0.6
SRP54-201ENST00000216774 CISD1Q9NZ45 108 aaKnown RBP11.31□□□□□ -0.6
SRP54-201ENST00000216774 H3BP45 60 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 J3QT63 122 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 APLNRP35414 380 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 CD200P41217 278 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 PNRC1Q12796 327 aaPredicted RBP11.3□□□□□ -0.6
SRP54-201ENST00000216774 NCMAPQ5T1S8 102 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 ZNF610Q8N9Z0 462 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 OR13D1Q8NGV5 346 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 MBD3L1Q8WWY6 194 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 CACNG5Q9UF02 275 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 FRYLO94915 3013 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 KMT2EQ8IZD2 1858 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 LILRA1O75019 489 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 IGKV1-39P01597 117 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 IGLV2-14P01704 120 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 IGKV1D-39P04432 117 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 CXCL1P09341 107 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 BCL2P10415 239 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 WNT5AP41221 380 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 HBG1P69891 147 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 HBG2P69892 147 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 SERF2P84101 59 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 Q6ZRM9 215 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 DDA1Q9BW61 102 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
SRP54-201ENST00000216774 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 RPRMQ9NS64 109 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 LIN7CQ9NUP9 197 aaKnown RBP11.3□□□□□ -0.6
SRP54-201ENST00000216774 ABI3Q9P2A4 366 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 GNG13Q9P2W3 67 aa11.3□□□□□ -0.6
SRP54-201ENST00000216774 MAGEA5P43359 124 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 TESK1Q15569 626 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 ZNF674Q2M3X9 581 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 ZNF343Q6P1L6 599 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 Q6P435 159 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 LURAP1LQ8IV03 231 aa11.29□□□□□ -0.6
SRP54-201ENST00000216774 Q8IYB0 196 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms