RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 AQP10Q96PS8 301 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 DIRC2Q96SL1 478 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 SPIN2AQ99865 258 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 SPIN2BQ9BPZ2 258 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 MGAQ8IWI9 3026 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 SPTBN2O15020 2390 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 ZGRF1Q86YA3 2104 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 RPS10-NUDT3A0A1W2PQS6 291 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 IGHV1-46P01743 117 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 UCP1P25874 307 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 CEACAM6P40199 344 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 FOXRED2Q8IWF2 684 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 CD177Q8N6Q3 437 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 OR1S1Q8NH92 325 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 IL22RA2Q969J5 263 aa14.61□□□□□ -0.07
VRK1-201ENST00000216639 PRR14LQ5THK1 2151 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 DCHS1Q96JQ0 3298 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 CDS2O95674 445 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 SCGB1D2O95969 90 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 LHBP01229 141 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 TESK1Q15569 626 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 OR5D13Q8NGL4 314 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 LHFPL5Q8TAF8 219 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 NINJ1Q92982 152 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 PHYHIPLQ96FC7 376 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 COQ2Q96H96 371 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 SNX22Q96L94 193 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 LURAP1Q96LR2 239 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 RNF7Q9UBF6 113 aa14.6□□□□□ -0.07
VRK1-201ENST00000216639 PRRC2CQ9Y520 2896 aaKnown RBP14.6□□□□□ -0.07
VRK1-201ENST00000216639 C12orf77C9JDV5 145 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 DEDDO75618 318 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 WNT2P09544 360 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 SFTPCP11686 197 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 F2RP25116 425 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 HOXA4Q00056 320 aaPredicted RBP14.59□□□□□ -0.07
VRK1-201ENST00000216639 WFIKKN1Q96NZ8 548 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 CITED4Q96RK1 184 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 SHARPINQ9H0F6 387 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 ESRP2Q9H6T0 727 aaKnown RBP14.59□□□□□ -0.07
VRK1-201ENST00000216639 ZC4H2Q9NQZ6 224 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 METRNQ9UJH8 293 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 LSM5Q9Y4Y9 91 aaKnown RBP14.59□□□□□ -0.07
VRK1-201ENST00000216639 SHANK1Q9Y566 2161 aa14.59□□□□□ -0.07
VRK1-201ENST00000216639 ANKRD11Q6UB99 2663 aaPredicted RBP14.59□□□□□ -0.07
VRK1-201ENST00000216639 IGKV1D-17A0A075B6S4 117 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 MGST3O14880 152 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 TNFSF12O43508 249 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 ZNF737O75373 536 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 HBZP02008 142 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 OR4A8P0C604 315 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 C1QTNF9P0C862 333 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 IRF2P14316 349 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 ID4P47928 161 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 SELENOHQ8IZQ5 122 aaKnown RBP14.58□□□□□ -0.07
VRK1-201ENST00000216639 OR1L1Q8NH94 360 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 MRGPRDQ8TDS7 321 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 RBPMSQ93062 196 aaKnown RBP14.58□□□□□ -0.07
VRK1-201ENST00000216639 RRNAD1Q96FB5 475 aaKnown RBP14.58□□□□□ -0.07
VRK1-201ENST00000216639 GCM1Q9NP62 436 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 KCNS2Q9ULS6 477 aa14.58□□□□□ -0.07
VRK1-201ENST00000216639 ANKRD34BA5PLL1 514 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 E5RGE8 158 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 K7EPK0 472 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 TFF1P04155 84 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 SERPINE2P07093 398 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 TNFRSF1AP19438 455 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 GLIPR1P48060 266 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 ADIPOQQ15848 244 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 THOC7Q6I9Y2 204 aaKnown RBP14.58□□□□□ -0.08
VRK1-201ENST00000216639 FAM71E2Q8N5Q1 922 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 UBALD1Q8TB05 177 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 Q8TCH9 128 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 ZCCHC14Q8WYQ9 949 aaKnown RBP14.58□□□□□ -0.08
VRK1-201ENST00000216639 PLEKHA2Q9HB19 425 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 COQ3Q9NZJ6 369 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 PTPRQQ9UMZ3 2332 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 NSG2Q9Y328 171 aa14.58□□□□□ -0.08
VRK1-201ENST00000216639 A0A1B0GW55 424 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 RNF212BA8MTL3 300 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 CCL21O00585 134 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 TAAR5O14804 337 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 ST8SIA3O43173 380 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 SPINT2O43291 252 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 KCNAB3O43448 404 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 MBPP02686 304 aaPredicted RBP14.57□□□□□ -0.08
VRK1-201ENST00000216639 ADH4P08319 380 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 OR8U9P0C7N5 309 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 DUX4L2P0CJ85 424 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 DUX4L3P0CJ86 424 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 DUX4L4P0CJ87 422 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 DUX4L5P0CJ88 424 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 DUX4L6P0CJ89 424 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 DUX4L7P0CJ90 424 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 TPT1P13693 172 aaKnown RBP14.57□□□□□ -0.08
VRK1-201ENST00000216639 VDAC1P21796 283 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 CHRNB4P30926 498 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 EDDM3AQ14507 147 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 SPRNQ5BIV9 151 aa14.57□□□□□ -0.08
VRK1-201ENST00000216639 ZBTB34Q8NCN2 500 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms