RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 NANOS3P60323 173 aaKnown RBP11.83□□□□□ -0.52
SF3A1-201ENST00000215793 MARS2Q96GW9 593 aaKnown RBP11.83□□□□□ -0.52
SF3A1-201ENST00000215793 STRCQ7RTU9 1775 aa11.83□□□□□ -0.52
SF3A1-201ENST00000215793 SERF2P84101 59 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 OR4D10Q8NGI6 311 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 ISOC2Q96AB3 205 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 OR2J1Q9GZK6 312 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 SMPD2O60906 423 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 MELTFP08582 738 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 HOXD4P09016 255 aaPredicted RBP11.82□□□□□ -0.52
SF3A1-201ENST00000215793 RPL7P18124 248 aaKnown RBP11.82□□□□□ -0.52
SF3A1-201ENST00000215793 KIR3DL2P43630 455 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 RPL31P62899 125 aaKnown RBP11.82□□□□□ -0.52
SF3A1-201ENST00000215793 NAAAQ02083 359 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 KHDC3LQ587J8 217 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 ZNF441Q8N8Z8 693 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 MRPL30Q8TCC3 161 aaKnown RBP11.82□□□□□ -0.52
SF3A1-201ENST00000215793 TTTY12Q9BZ98 90 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 TNFSF18Q9UNG2 199 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 VSIG4Q9Y279 399 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 CENPVL1A0A0U1RR11 272 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 ZNF205O95201 554 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 IFI6P09912 130 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 PSG2P11465 335 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 AESQ08117 197 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 P2RY6Q15077 328 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 LRRC3BQ96PB8 259 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 ERGP11308 486 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 ATP6V0CP27449 155 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 PET117Q6UWS5 81 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 GPX7Q96SL4 187 aaPredicted RBP11.82□□□□□ -0.52
SF3A1-201ENST00000215793 PRO1933Q9H354 126 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 TREM2Q9NZC2 230 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 KCNMB2Q9Y691 235 aa11.82□□□□□ -0.52
SF3A1-201ENST00000215793 PPIAL4EA0A075B759 164 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 PPIAL4DF5H284 164 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 H3BQ15 152 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 MGST3O14880 152 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 RAB29O14966 203 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 UPK3AO75631 287 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 IGF2P01344 180 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 IGKV1D-16P01601 117 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 PPIAL4FP0DN26 164 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 HERVK_113P61574 105 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.81□□□□□ -0.52
SF3A1-201ENST00000215793 RAB24Q969Q5 203 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 WIPI2Q9Y4P8 454 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 PPIAL4AQ9Y536 164 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 PATE3B3GLJ2 98 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 HPRT1P00492 218 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 FCGR3AP08637 254 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 UCNP55089 124 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 CEACAM21Q3KPI0 293 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 TMEM255AQ5JRV8 349 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 DIRC2Q96SL1 478 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 SLC25A33Q9BSK2 321 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 MRPS18BQ9Y676 258 aaKnown RBP11.81□□□□□ -0.52
SF3A1-201ENST00000215793 TRAV39A0A0B4J263 110 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 MFSD2BA6NFX1 497 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 ISLRO14498 428 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 PRDX2P32119 198 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 MMDQ15546 238 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 CEBPEQ15744 281 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 PMS2CLQ68D20 193 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 ZPLD1Q8TCW7 415 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 MAP1LC3CQ9BXW4 147 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 LIMS1P48059 325 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 ROM1Q03395 351 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
SF3A1-201ENST00000215793 H1FOOQ8IZA3 346 aaPredicted RBP11.81□□□□□ -0.52
SF3A1-201ENST00000215793 SRSF10O75494 262 aaKnown RBP11.8□□□□□ -0.52
SF3A1-201ENST00000215793 MMP9P14780 707 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 TEX30Q5JUR7 227 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 Q6ZN92 141 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 OR5AU1Q8NGC0 362 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 RSRP1Q9BUV0 290 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 SPAARA0A1B0GVQ0 90 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 CORTO00230 105 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 PITX3O75364 302 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 SFTPCP11686 197 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 DAOP14920 347 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 CD40P25942 277 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 HOXA6P31267 233 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 DCAF16Q9NXF7 216 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 SLC25A10Q9UBX3 287 aaPredicted RBP11.8□□□□□ -0.52
SF3A1-201ENST00000215793 PILRAQ9UKJ1 303 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 KLK13Q9UKR3 277 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 TSPAN2O60636 221 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 PPOXP50336 477 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 FGF12P61328 243 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 PSG4Q00888 419 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 RBPMS2Q6ZRY4 209 aaKnown RBP11.8□□□□□ -0.52
SF3A1-201ENST00000215793 SNX22Q96L94 193 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
SF3A1-201ENST00000215793 TMEM204Q9BSN7 226 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 KLHDC2Q9Y2U9 406 aa11.8□□□□□ -0.52
SF3A1-201ENST00000215793 SIRT4Q9Y6E7 314 aaPredicted RBP11.8□□□□□ -0.52
SF3A1-201ENST00000215793 CIDEAO60543 219 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms