RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TRBV5-7A0A0A0MS05 114 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 A0A1W2PP11 408 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 FAM90A10PA6NDY2 464 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 FAM90A7PA6NKC0 464 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 FAM90A23PA8MXZ1 464 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 SDCBPO00560 298 aaPredicted RBP12.48□□□□□ -0.41
ERCC1-201ENST00000013807 CA11O75493 328 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 SC5DO75845 299 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 CD1AP06126 327 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 GLAP06280 429 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 IL3RAP26951 378 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 GPR12P47775 334 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 CDX1P47902 265 aaPredicted RBP12.48□□□□□ -0.41
ERCC1-201ENST00000013807 PNLIPRP3Q17RR3 467 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 ATAD3CQ5T2N8 411 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 C18orf65Q6ZTR6 163 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 C8orf86Q6ZUL3 223 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 MOB3BQ86TA1 216 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 FAM71E2Q8N5Q1 922 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 DPF1Q92782 380 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 ORAI1Q96D31 301 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 B9D2Q9BPU9 175 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 CLEC2DQ9UHP7 191 aa12.48□□□□□ -0.41
ERCC1-201ENST00000013807 TRAV8-7A0A075B6U6 113 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 C12orf77C9JDV5 145 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 AIPO00170 330 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 MOSP00540 346 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 MYL12AP19105 171 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 HOXD3P31249 432 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-201ENST00000013807 REG1BP48304 166 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF134P52741 427 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 CFHR3Q02985 330 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 FOXE3Q13461 319 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 DCTN2Q13561 401 aaKnown RBP12.47□□□□□ -0.41
ERCC1-201ENST00000013807 SLC22A6Q4U2R8 563 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 DEFB121Q5J5C9 76 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 SYT6Q5T7P8 510 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-201ENST00000013807 TRAT1Q6PIZ9 186 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF554Q86TJ5 538 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 STX19Q8N4C7 294 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 KLHL30-AS1Q8NEE0 82 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 OR13C5Q8NGS8 318 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 TMEM80Q96HE8 168 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 S1PR3Q99500 378 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 C8orf4Q9NR00 106 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 CKLFQ9UBR5 152 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 LINC00527Q9UJ94 153 aa12.47□□□□□ -0.41
ERCC1-201ENST00000013807 MAGEA13PA6NCF6 341 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 MCRIP1C9JLW8 97 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 IGF1P05019 195 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 ELANEP08246 267 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 ADARB1P78563 741 aaKnown RBP12.46□□□□□ -0.41
ERCC1-201ENST00000013807 KIR2DS1Q14954 304 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 CT45A1Q5HYN5 189 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 TTC23Q5W5X9 447 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 FAM53AQ6NSI3 398 aaPredicted RBP12.46□□□□□ -0.41
ERCC1-201ENST00000013807 CT45A3Q8NHU0 189 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 CCDC107Q8WV48 283 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 RAX2Q96IS3 184 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 CHCHD6Q9BRQ6 235 aa12.46□□□□□ -0.41
ERCC1-201ENST00000013807 MBNL3Q9NUK0 354 aaKnown RBP12.46□□□□□ -0.41
ERCC1-201ENST00000013807 IGHV3-72A0A0B4J1Y9 119 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 NCBP2LA6PVI3 153 aaKnown RBP12.45□□□□□ -0.42
ERCC1-201ENST00000013807 CCL24O00175 119 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 SPINT2O43291 252 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 RAMP3O60896 148 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 IGHG4P01861 327 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 TAS2R43P59537 309 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 MED21Q13503 144 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 GPR50Q13585 617 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 LY6G6FQ5SQ64 297 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 C6orf183Q5T699 404 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 PACRGLQ8N7B6 248 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 SETD9Q8NE22 299 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 GGHQ92820 318 aa12.45□□□□□ -0.42
ERCC1-201ENST00000013807 MRPS28Q9Y2Q9 187 aaKnown RBP12.45□□□□□ -0.42
ERCC1-201ENST00000013807 STAB2Q8WWQ8 2551 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 IGHV3-43A0A0B4J1X8 118 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 NUDT19A8MXV4 375 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 ZNF736B4DX44 427 aaPredicted RBP12.44□□□□□ -0.42
ERCC1-201ENST00000013807 SLC31A2O15432 143 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 LANCL1O43813 399 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 RPLP1P05386 114 aaKnown RBP12.44□□□□□ -0.42
ERCC1-201ENST00000013807 IGHV3-43DP0DP04 118 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 FUT3P21217 361 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 ST3GAL4Q11206 333 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 DOC2BQ14184 412 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 SIGIRRQ6IA17 410 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 RAB12Q6IQ22 244 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 GLIPR1L1Q6UWM5 242 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 OR8U1Q8NH10 309 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 MYOZ3Q8TDC0 251 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 NEK7Q8TDX7 302 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 THRSPQ92748 146 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 MUL1Q969V5 352 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 Q96M66 194 aa12.44□□□□□ -0.42
ERCC1-201ENST00000013807 OR14A2Q96R54 314 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms