RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ube2v2Q9D2M8 145 aa19.49■□□□□ 0.71
Scn1b-201ENSMUST00000098548 1700013G24RikQ9DAC6 286 aa19.49■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Enpp7D3Z6V6 446 aa19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 GdnfP48540 211 aa19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Cbr1P48758 277 aa19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Kcng3P59053 433 aa19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Ndufb6Q3UIU2 128 aa19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Zfp61Q923D1 555 aa19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 2210010C04RikQ9CPN9 247 aaKnown RBP19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Ndufa9Q9DC69 377 aaKnown RBP19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 DiabloQ9JIQ3 237 aa19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Insl6Q9QY05 191 aa19.48■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Gm5799E9Q2M1 201 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Gm12830F6XVH0 157 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Vmn2r66K7N6R9 851 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Smr2O09133 150 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 EhfO70273 300 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Spi1P17433 272 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Q3U1D9 316 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Zfp872Q3UVL3 465 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 GcsamQ6RFH4 181 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Smap2Q7TN29 428 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Znf250Q7TNU6 535 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Zfp3Q8BLB0 497 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Plcxd3Q8BLJ3 321 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Olfr483Q8VG05 315 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Zfp959Q91VM8 539 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Exosc4Q921I9 245 aaKnown RBP19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Dnaja3Q99M87 480 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 SpdefQ9WTP3 325 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Zfyve26Q5DU37 2529 aa19.47■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Igkv13-84A0A140T8N3 115 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 IfnabL7MTU6 190 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 H1f0P10922 194 aaKnown RBP19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Gm21093Q6GQS8 569 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Mrpl48Q8JZS9 211 aaKnown RBP19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Olfr168Q8VF05 312 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Defb8Q91V82 60 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 9230104L09RikQ9D264 133 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Cst11Q9D269 139 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Q9DAE8 263 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Gmeb1Q9JL60 562 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Itpr3P70227 2670 aa19.46■□□□□ 0.71
Scn1b-201ENSMUST00000098548 Ankrd60A2AMD2 318 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Gm21833J3QPK1 500 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Tacr3P47937 452 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Fabp2P55050 132 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Pip5k1aP70182 546 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Vstm2lQ6PDS0 220 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Gpr137bQ8BNQ3 385 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Ube3dQ8BX13 368 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Slc38a2Q8CFE6 504 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Tmem246Q91YV9 403 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Rwdd2bQ99M03 290 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Olfr894Q9EQB2 313 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Wdr31Q9JHB4 367 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Cspg4Q8VHY0 2327 aa19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Tet1Q3URK3 2007 aaKnown RBP19.45■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Ighv1-13A0A075B5I0 98 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Gm10376D3YXI8 184 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Gm4181E9Q7X3 184 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Olfr178E9Q9T3 319 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Gm10375L7N286 184 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Ccr6O54689 367 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Il5P04401 133 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 LepP41160 167 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Hhipl1Q14DK5 791 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Mpzl1Q3TEW6 270 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Lrrc52Q5M8M9 314 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Q8R2K8 148 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Cmtm3Q99LJ5 184 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Mid1ip1Q9CQ20 182 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Aig1Q9D8B1 262 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 1700001F09RikQ9DAR5 184 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Clec4dQ9Z2H6 219 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 DspE9Q557 2883 aaKnown RBP19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Obp1bA2AEP0 171 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Gm14743A2BHD2 171 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 BC035044E0CXF8 138 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Olfr1564K7N6V7 318 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 CckarO08786 436 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Map2k4P47809 397 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Kcnj8P97794 424 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Olfr324Q5NCC7 333 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Pou4f3Q63955 338 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Olfr453Q7TRV7 317 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Alg12Q8VDB2 486 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Olfr361Q8VF16 322 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Olfr507Q8VG13 316 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 D6Wsu163eQ91YN0 552 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 BlvrbQ923D2 206 aaKnown RBP19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Kcnip1Q9JJ57 227 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Syngr4Q9Z1L2 233 aa19.44■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Hcfc1Q61191 2045 aaKnown RBP19.43■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Gm12789B1AUV7 164 aa19.43■□□□□ 0.7
Scn1b-201ENSMUST00000098548 PspnO70300 156 aa19.43■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Rag2P21784 527 aa19.43■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Dusp1P28563 367 aa19.43■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Atp4bP50992 294 aa19.43■□□□□ 0.7
Scn1b-201ENSMUST00000098548 Tcl1b1P56840 116 aa19.43■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms