RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PRIMA1Q86XR5 153 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 ASCC1Q8N9N2 400 aaKnown RBP10.95□□□□□ -0.66
PHGDH-221ENST00000641573 OR6F1Q8NGZ6 308 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 ANGPTL6Q8NI99 470 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 MARCH1Q8TCQ1 289 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 MED30Q96HR3 178 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 VRK1Q99986 396 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-221ENST00000641573 ZNF2Q9BSG1 426 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-221ENST00000641573 ALX4Q9H161 411 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-221ENST00000641573 GPN1Q9HCN4 374 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-221ENST00000641573 CBLN4Q9NTU7 201 aa10.95□□□□□ -0.66
PHGDH-221ENST00000641573 PLCE1Q9P212 2302 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 TRAV39A0A0B4J263 110 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 OOEPA6NGQ2 149 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 OR5H14A6NHG9 310 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 TMEM178BH3BS89 294 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 HPXP02790 462 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 SCTP09683 121 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 MUC1P15941 1255 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-221ENST00000641573 RCC1P18754 421 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-221ENST00000641573 FPR2P25090 351 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 GLP1RP43220 463 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 RRAS2P62070 204 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-221ENST00000641573 AESQ08117 197 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 IGSF11Q5DX21 431 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 AADACL3Q5VUY0 350 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 TEX36Q5VZQ5 186 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 STUMQ69YW2 141 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 ZNF660Q6AZW8 331 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-221ENST00000641573 DHRS11Q6UWP2 260 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 C1orf87Q8N0U7 546 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 DEFB108BQ8NET1 73 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 WFDC11Q8NEX6 87 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 PPP1R35Q8TAP8 253 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 PPP1R14BQ96C90 147 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 COQ2Q96H96 371 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 SNX22Q96L94 193 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 SCGB3A2Q96PL1 93 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 SHARPINQ9H0F6 387 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 MED28Q9H204 178 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 MYOZ1Q9NP98 299 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-221ENST00000641573 TMEM106BQ9NUM4 274 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 FBXO9Q9UK97 447 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-221ENST00000641573 TRAPPC2LQ9UL33 140 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 MGAT4AQ9UM21 535 aa10.94□□□□□ -0.66
PHGDH-221ENST00000641573 CHD3Q12873 2000 aaKnown RBP10.94□□□□□ -0.66
PHGDH-221ENST00000641573 A6NNC1 897 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 CEACAM18A8MTB9 384 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 SNRPGP15A8MWD9 76 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 LGALS8O00214 317 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 CCNKO75909 580 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 GYPAP02724 150 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 CTXN2P0C2S0 81 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 PGAM2P15259 253 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 FCGR2CP31995 323 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 SEC61A1P61619 476 aaKnown RBP10.93□□□□□ -0.66
PHGDH-221ENST00000641573 CD300CQ08708 224 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 KRBOX4Q5JUW0 171 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 SLC25A42Q86VD7 318 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 OR4A4PQ8NGN8 299 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 CAPSLQ8WWF8 208 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 CCL17Q92583 94 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 MBD6Q96DN6 1003 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 SDSLQ96GA7 329 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 TMPRSS13Q9BYE2 586 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 KIF25Q9UIL4 384 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 ZNF221Q9UK13 617 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 GPR132Q9UNW8 380 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 MAB21L2Q9Y586 359 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 NBEAL1Q6ZS30 2694 aa10.93□□□□□ -0.66
PHGDH-221ENST00000641573 PPIAL4EA0A075B759 164 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 MEIKINA0A087WXM9 373 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 TRAV38-1A0A0B4J264 116 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 IGKV1-6A0A0C4DH72 117 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 IGHV1-69-2A0A0G2JMI3 117 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 A0A1W2PPR1 153 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 PPIAL4DF5H284 164 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 MGST3O14880 152 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 BET1O15155 118 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 SSNA1O43805 119 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 CREBL2O60519 120 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-221ENST00000641573 CD8AP01732 235 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 SOD3P08294 240 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 OR4E1P0C645 316 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 DANCRP0C864 163 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 PPIAL4FP0DN26 164 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 AADACP22760 399 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 ECI1P42126 302 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 HERPUD1Q15011 391 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 FCN2Q15485 313 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 SURF2Q15527 256 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-221ENST00000641573 HMGN3Q15651 99 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 DEFB113Q30KQ7 82 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 C4orf46Q504U0 113 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 CD276Q5ZPR3 534 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 ZNF626Q68DY1 528 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 PEG10Q86TG7 708 aaKnown RBP10.92□□□□□ -0.66
PHGDH-221ENST00000641573 ZNF561Q8N587 486 aa10.92□□□□□ -0.66
PHGDH-221ENST00000641573 ADAD2Q8NCV1 583 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms