RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LGALSLQ3ZCW2 172 aaPredicted RBP1.57□□□□□ -2.16
CCDC7-216ENST00000640058 OR10J3Q5JRS4 329 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 CYHR1Q6ZMK1 362 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 C17orf78Q8N4C9 275 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 KRTCAP2Q8N6L1 136 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 PDCD6IPQ8WUM4 868 aaKnown RBP1.57□□□□□ -2.16
CCDC7-216ENST00000640058 CLDN23Q96B33 292 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 MRAP2Q96G30 205 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 ATP6V1G3Q96LB4 118 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 PGLYRP3Q96LB9 341 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 APOL4Q9BPW4 351 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 FAAP24Q9BTP7 215 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 TSSK6Q9BXA6 273 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 NOSIPQ9Y314 301 aaKnown RBP1.57□□□□□ -2.16
CCDC7-216ENST00000640058 ZNF638Q14966 1978 aaKnown RBP1.57□□□□□ -2.16
CCDC7-216ENST00000640058 KIAA0232Q92628 1395 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 FBN3Q75N90 2809 aa1.57□□□□□ -2.16
CCDC7-216ENST00000640058 ZCCHC6Q5VYS8 1495 aaKnown RBP1.56□□□□□ -2.16
CCDC7-216ENST00000640058 DSCAML1Q8TD84 2053 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 IGHV3OR15-7A0A075B7D8 119 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 TRAV8-2A0A0B4J237 113 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 A0A1W2PNM2 257 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 FGF16O43320 207 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 SYNGR2O43760 224 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 NQO2P16083 231 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 SPNP16150 400 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 MAP3K7CLP57077 242 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 RHOAP61586 193 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 TPM4P67936 248 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 FLOT2Q14254 428 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 TMEM249Q2WGJ8 235 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 FAM19A3Q7Z5A8 133 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 SPATA24Q86W54 205 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 LRRC6Q86X45 466 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 C10orf107Q8IVU9 208 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 KCTD4Q8WVF5 259 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 IFT81Q8WYA0 676 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 RAD51AP1Q96B01 352 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 SLC25A44Q96H78 314 aaPredicted RBP1.56□□□□□ -2.16
CCDC7-216ENST00000640058 ARL5BQ96KC2 179 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 CYTH2Q99418 400 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 ULBP1Q9BZM6 244 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 NSRP1Q9H0G5 558 aaKnown RBP1.56□□□□□ -2.16
CCDC7-216ENST00000640058 TAS2R13Q9NYV9 303 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 IL20Q9NYY1 176 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 CHMP5Q9NZZ3 219 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 MCTS1Q9ULC4 181 aaKnown RBP1.56□□□□□ -2.16
CCDC7-216ENST00000640058 POMPQ9Y244 141 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 V9GYY5 206 aaPredicted RBP1.56□□□□□ -2.16
CCDC7-216ENST00000640058 BAHCC1Q9P281 2608 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 ABCB11O95342 1321 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 BRD4O60885 1362 aaPredicted RBP1.56□□□□□ -2.16
CCDC7-216ENST00000640058 MYO15BQ96JP2 1530 aa1.56□□□□□ -2.16
CCDC7-216ENST00000640058 SORL1Q92673 2214 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 TRBV24-1A0A075B6N3 115 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 A0A1B0GTI1 187 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 PSIP1O75475 530 aaKnown RBP1.55□□□□□ -2.16
CCDC7-216ENST00000640058 CDS2O95674 445 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 NPPAP01160 153 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 LTAP01374 205 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 ZNF3P17036 446 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 EVI2BP34910 448 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 MAGEA6P43360 314 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 INPP1P49441 399 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 MP68P56378 58 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 RAB31Q13636 194 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 PYCR3Q53H96 274 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 HES3Q5TGS1 186 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 OLIG3Q7RTU3 272 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 NIT1Q86X76 327 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 MUC15Q8N387 334 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 TCAIMQ8N3R3 496 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 FER1L6-AS1Q8NA97 138 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 LRRC45Q96CN5 670 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 DDIT4LQ96D03 193 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 TAPBPLQ9BX59 468 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 SPZ1Q9BXG8 430 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 ALX4Q9H161 411 aaPredicted RBP1.55□□□□□ -2.16
CCDC7-216ENST00000640058 OR51E2Q9H255 320 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 VCX3BQ9H321 246 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 TREM1Q9NP99 234 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 RPUSD1Q9UJJ7 312 aaKnown RBP1.55□□□□□ -2.16
CCDC7-216ENST00000640058 BTRCQ9Y297 605 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 LINC00588Q9Y4M8 146 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 OTOFQ9HC10 1997 aa1.55□□□□□ -2.16
CCDC7-216ENST00000640058 ERICH2A1L162 156 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 A6NED7 52 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 SDHAF1A6NFY7 115 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 IQCF5A8MTL0 148 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 HSBP1L1C9JCN9 74 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 MKRN2OSH3BPM6 223 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 OVOL1O14753 267 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 LECT2O14960 151 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 PSCAO43653 123 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 SH2D1AO60880 128 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 CRTAPO75718 401 aaPredicted RBP1.54□□□□□ -2.16
CCDC7-216ENST00000640058 LIMS3P0CW19 117 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 LIMS4P0CW20 117 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 PSKH1P11801 424 aa1.54□□□□□ -2.16
CCDC7-216ENST00000640058 AKR1C4P17516 323 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms