RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 HCKP08631 526 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 RAB3AP20336 220 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 SSTR5P35346 364 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 VHLP40337 213 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 ZNF137PP52743 207 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 RUNX1Q01196 453 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 KIAA0141Q14154 515 aaPredicted RBP6.88□□□□□ -1.31
CLN8-214ENST00000637594 STEAP3Q658P3 488 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 MOB3BQ86TA1 216 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 LINC00596Q86U02 117 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 FAM71E2Q8N5Q1 922 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 SUMF2Q8NBJ7 301 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 OR5AK2Q8NH90 309 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 RTN4IP1Q8WWV3 396 aaPredicted RBP6.88□□□□□ -1.31
CLN8-214ENST00000637594 LGALS12Q96DT0 336 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 DUX3Q96PT4 197 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 S1PR3Q99500 378 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 RASL11BQ9BPW5 248 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 DPCDQ9BVM2 203 aaPredicted RBP6.88□□□□□ -1.31
CLN8-214ENST00000637594 MRPS18AQ9NVS2 196 aaKnown RBP6.88□□□□□ -1.31
CLN8-214ENST00000637594 FAM118AQ9NWS6 357 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 CHCHD3Q9NX63 227 aaKnown RBP6.88□□□□□ -1.31
CLN8-214ENST00000637594 OAZ3Q9UMX2 235 aa6.88□□□□□ -1.31
CLN8-214ENST00000637594 SEC14L6B5MCN3 397 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 I3L521 148 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 GABRPO00591 440 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 HSPB6O14558 160 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 MAGEB3O15480 346 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 TXNL1O43396 289 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 RRP9O43818 475 aaKnown RBP6.87□□□□□ -1.31
CLN8-214ENST00000637594 MT-ND4P03905 459 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 ALPLP05186 524 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 OR5H8P0DN80 308 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 GABRB1P18505 474 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
CLN8-214ENST00000637594 ECI1P42126 302 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 GNG10P50151 68 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 LUMP51884 338 aaPredicted RBP6.87□□□□□ -1.31
CLN8-214ENST00000637594 RSU1Q15404 277 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 TMEM30BQ3MIR4 351 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 PIGYQ3MUY2 71 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 CASC10Q5T4H9 136 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 SLC25A48Q6ZT89 311 aaKnown RBP6.87□□□□□ -1.31
CLN8-214ENST00000637594 LHFPL3Q86UP9 236 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 UBE2E2Q96LR5 201 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 PRR25Q96S07 402 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 ISG20L2Q9H9L3 353 aaKnown RBP6.87□□□□□ -1.31
CLN8-214ENST00000637594 IMPAD1Q9NX62 359 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 GFOD1Q9NXC2 390 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 DHDHQ9UQ10 334 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 ST3GAL6Q9Y274 331 aa6.87□□□□□ -1.31
CLN8-214ENST00000637594 ZNF256Q9Y2P7 627 aaPredicted RBP6.87□□□□□ -1.31
CLN8-214ENST00000637594 TRAV39A0A0B4J263 110 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 A0A1W2PPE3 182 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 TMEM30CPA0ZSE6 113 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 FAM90A10PA6NDY2 464 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 E9PI62 339 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 SDCBPO00560 298 aaPredicted RBP6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZNF780AO75290 641 aaPredicted RBP6.86□□□□□ -1.31
CLN8-214ENST00000637594 FADS2O95864 444 aaKnown RBP6.86□□□□□ -1.31
CLN8-214ENST00000637594 IGLV1-40P01703 118 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 VDAC1P21796 283 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 IL3RAP26951 378 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 SOX6P35712 828 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 REG1BP48304 166 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 RASSF2P50749 326 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZNF134P52741 427 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 GBX2P52951 348 aaPredicted RBP6.86□□□□□ -1.31
CLN8-214ENST00000637594 F2RL1P55085 397 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 RBM11P57052 281 aaKnown RBP6.86□□□□□ -1.31
CLN8-214ENST00000637594 RAB25P57735 213 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 RAB40BQ12829 278 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZSCAN26Q16670 478 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 LTC4SQ16873 150 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 MPV17LQ2QL34 196 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 DEFB136Q30KP8 78 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZNF260Q3ZCT1 412 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 CCDC58Q4VC31 144 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZNF497Q6ZNH5 498 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZNF429Q86V71 674 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 GAPTQ8N292 157 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZNF491Q8N8L2 437 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZNF439Q8NDP4 499 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 OR11H1Q8NG94 326 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 OR52N1Q8NH53 320 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 RHOXF1Q8NHV9 184 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 MUC7Q8TAX7 377 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 TNFAIP8L1Q8WVP5 186 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ARL11Q969Q4 196 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 PDCD1LG2Q9BQ51 273 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 HSPB9Q9BQS6 159 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ALG8Q9BVK2 526 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 METTL9Q9H1A3 318 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 PAK1IP1Q9NWT1 392 aaPredicted RBP6.86□□□□□ -1.31
CLN8-214ENST00000637594 ERVK13-1Q9NX77 482 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 ZNF581Q9P0T4 197 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 SMAD5-AS1Q9Y6J3 95 aa6.86□□□□□ -1.31
CLN8-214ENST00000637594 IGHV3-72A0A0B4J1Y9 119 aa6.85□□□□□ -1.31
CLN8-214ENST00000637594 ZNF736B4DX44 427 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms