RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 OR8H3Q8N146 312 aa15.15■□□□□ 0.02
CLN6-221ENST00000637494 NKAIN3Q8N8D7 197 aa15.15■□□□□ 0.02
CLN6-221ENST00000637494 OR4X2Q8NGF9 303 aa15.15■□□□□ 0.02
CLN6-221ENST00000637494 ARL11Q969Q4 196 aa15.15■□□□□ 0.02
CLN6-221ENST00000637494 MOB4Q9Y3A3 225 aa15.15■□□□□ 0.02
CLN6-221ENST00000637494 TRAV39A0A0B4J263 110 aa15.14■□□□□ 0.01
CLN6-221ENST00000637494 AIPO00170 330 aa15.14■□□□□ 0.01
CLN6-221ENST00000637494 SDCBPO00560 298 aaPredicted RBP15.14■□□□□ 0.01
CLN6-221ENST00000637494 OR52M1Q8NGK5 317 aa15.14■□□□□ 0.01
CLN6-221ENST00000637494 WIPF2Q8TF74 440 aaPredicted RBP15.14■□□□□ 0.01
CLN6-221ENST00000637494 CCDC107Q8WV48 283 aa15.14■□□□□ 0.01
CLN6-221ENST00000637494 DERL3Q96Q80 235 aa15.14■□□□□ 0.01
CLN6-221ENST00000637494 MND1Q9BWT6 205 aa15.14■□□□□ 0.01
CLN6-221ENST00000637494 DCLRE1BQ9H816 532 aa15.14■□□□□ 0.01
CLN6-221ENST00000637494 WNK1Q9H4A3 2382 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 ORC5O43913 435 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 SNRNP70P08621 437 aaKnown RBP15.13■□□□□ 0.01
CLN6-221ENST00000637494 TMEM11P17152 192 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 IL3RAP26951 378 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 NANOGP1Q8N7R0 232 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 OR56B4Q8NH76 319 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 FBLIM1Q8WUP2 373 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 MYDGFQ969H8 173 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 SCN3BQ9NY72 215 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 TRAPPC2LQ9UL33 140 aa15.13■□□□□ 0.01
CLN6-221ENST00000637494 A0A1W2PP11 408 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 A0A1W2PRX2 142 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 TCRBV4S1A1TA0A5B7 111 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 MAGEA13PA6NCF6 341 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A10PA6NDY2 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A18PA6NE21 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A16PA6NEW6 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A20PA6NIJ5 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A7PA6NKC0 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A12PA8MX19 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A5PA8MXJ8 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A23PA8MXZ1 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 G3V4G9 280 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 HSD17B6O14756 317 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 SPINT2O43291 252 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 CRTAPO75718 401 aaPredicted RBP15.12■□□□□ 0.01
CLN6-221ENST00000637494 GAPDHP04406 335 aaKnown RBP15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A15PP0C7V4 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A13PP0C7W8 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A14PP0C7W9 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A24PP0C7X0 464 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 PF4V1P10720 104 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 UTF1Q5T230 341 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 C6orf183Q5T699 404 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 TRAT1Q6PIZ9 186 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 ZNF497Q6ZNH5 498 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 DRAM1Q8N682 238 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 TFAP2CQ92754 450 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 UQCC2Q9BRT2 126 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 SELENOIQ9C0D9 397 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 ETAA1Q9NY74 926 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 ZNF581Q9P0T4 197 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 GHRLQ9UBU3 117 aa15.12■□□□□ 0.01
CLN6-221ENST00000637494 TSSC4Q9Y5U2 329 aaPredicted RBP15.12■□□□□ 0.01
CLN6-221ENST00000637494 FAM90A9PA6NNJ1 464 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 CCRL2O00421 344 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 MT-ND4P03905 459 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 MGMTP16455 207 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 CD83Q01151 205 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 TMEM30BQ3MIR4 351 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 RAB12Q6IQ22 244 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 LAIR2Q6ISS4 152 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 MOB3BQ86TA1 216 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 MS4A15Q8N5U1 240 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 CST11Q9H112 138 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 PEX16Q9Y5Y5 336 aa15.11■□□□□ 0.01
CLN6-221ENST00000637494 VWFP04275 2813 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 A0A1W2PPE3 182 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 A0A1W2PPI3 338 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 PTGES3LE9PB15 166 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 CA11O75493 328 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 CDK1P06493 297 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 CD33P20138 364 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 GABPB1Q06547 395 aaPredicted RBP15.1■□□□□ 0.01
CLN6-221ENST00000637494 ZNF816Q0VGE8 651 aaPredicted RBP15.1■□□□□ 0.01
CLN6-221ENST00000637494 GPR50Q13585 617 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 Q3ZCU0 254 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 KHDC1LQ5JSQ8 128 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 SYT6Q5T7P8 510 aaPredicted RBP15.1■□□□□ 0.01
CLN6-221ENST00000637494 SAMD5Q5TGI4 173 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 LINC00311Q8N616 119 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 C8orf31Q8N9H6 132 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 BANF2Q9H503 90 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 FKBP14Q9NWM8 211 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 GFOD1Q9NXC2 390 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 RCC2Q9P258 522 aaKnown RBP15.1■□□□□ 0.01
CLN6-221ENST00000637494 GNG12Q9UBI6 72 aa15.1■□□□□ 0.01
CLN6-221ENST00000637494 SH2D7A6NKC9 451 aaPredicted RBP15.09■□□□□ 0.01
CLN6-221ENST00000637494 ANKRD65E5RJM6 399 aa15.09■□□□□ 0.01
CLN6-221ENST00000637494 C15orf65H3BRN8 121 aa15.09■□□□□ 0.01
CLN6-221ENST00000637494 FGF16O43320 207 aa15.09■□□□□ 0.01
CLN6-221ENST00000637494 IGKV1D-33P01593 117 aa15.09■□□□□ 0.01
CLN6-221ENST00000637494 IGKV1-33P01594 117 aa15.09■□□□□ 0.01
CLN6-221ENST00000637494 PF4P02776 101 aa15.09■□□□□ 0.01
CLN6-221ENST00000637494 GLAP06280 429 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms