RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PGA5P0DJD9 388 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 SPP1P10451 314 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 F2RP25116 425 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 LPAR6P43657 344 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 DVL1P1P54792 670 aaPredicted RBP10.31□□□□□ -0.76
CLN8-212ENST00000637083 ERVK11-1P61568 191 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 EWSR1Q01844 656 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLN8-212ENST00000637083 SRSF6Q13247 344 aaKnown RBP10.31□□□□□ -0.76
CLN8-212ENST00000637083 ZNF146Q15072 292 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 GUSBP1Q15486 140 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 HMGN3Q15651 99 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 ATRAIDQ6UW56 229 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 C17orf78Q8N4C9 275 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 LYPD6BQ8NI32 183 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 USB1Q9BQ65 265 aaKnown RBP10.31□□□□□ -0.76
CLN8-212ENST00000637083 OBP2BQ9NPH6 170 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 TRAPPC2LQ9UL33 140 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 ZFHX4Q86UP3 3567 aa10.31□□□□□ -0.76
CLN8-212ENST00000637083 FRYQ5TBA9 3013 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 IGKV1D-13A0A0B4J2D9 117 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 AHRRA9YTQ3 701 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 ADAM20O43506 726 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 TSPAN15O95858 294 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 SERPINE2P07093 398 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 DANCRP0C864 163 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 IGKV1-13P0DP09 117 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 AKR1C2P52895 323 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 AKR1C1Q04828 323 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 BAXQ07812 192 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 ZNF497Q6ZNH5 498 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 GCNT2Q8N0V5 402 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 CNEP1R1Q8N9A8 125 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 NRIP2Q9BQI9 281 aa10.3□□□□□ -0.76
CLN8-212ENST00000637083 LYRM2Q9NU23 88 aaPredicted RBP10.3□□□□□ -0.76
CLN8-212ENST00000637083 CNOT1A5YKK6 2376 aaKnown RBP10.3□□□□□ -0.76
CLN8-212ENST00000637083 ZNF891A8MT65 544 aaPredicted RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 TRIM77I1YAP6 450 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 OR2H2O95918 312 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 IGKV3-15P01624 115 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 CELA3BP08861 270 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 COX5AP20674 150 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 EIF2S3P41091 472 aaKnown RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 CAMLGP49069 296 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 ID3Q02535 119 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 MZT1Q08AG7 82 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 NMSQ5H8A3 153 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 LILRB1Q8NHL6 650 aaPredicted RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 BCL2L14Q9BZR8 327 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 KCNIP1Q9NZI2 227 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 TAAR3PQ9P1P4 343 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 ERRFI1Q9UJM3 462 aaPredicted RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 WIPI2Q9Y4P8 454 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 CFAP47Q6ZTR5 3102 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 A0A1B0GU03 582 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 RNF212BA8MTL3 300 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 SIRPB1O00241 398 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 SLC33A1O00400 549 aaPredicted RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 CDIPTO14735 213 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 PITX3O75364 302 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 PRH1P02810 166 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 CD5P06127 495 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 CD200P41217 278 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 NHLH2Q02577 135 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 PSG7Q13046 419 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 ZNF154Q13106 437 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 PEA15Q15121 130 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 C20orf204Q6ZNR8 217 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 PUSL1Q8N0Z8 303 aaKnown RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 CLRN3Q8NCR9 226 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 OR8G5Q8NG78 346 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 KLF14Q8TD94 323 aaPredicted RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 CXXC4Q9H2H0 198 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 C11orf1Q9H5F2 150 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 PURGQ9UJV8 347 aaKnown RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 ZDHHC8Q9ULC8 765 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 RBM7Q9Y580 266 aaKnown RBP10.29□□□□□ -0.76
CLN8-212ENST00000637083 DMXL1Q9Y485 3027 aa10.29□□□□□ -0.76
CLN8-212ENST00000637083 UMAD1C9J7I0 102 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 MUC1P15941 1255 aaPredicted RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 KIR2DL2P43627 348 aaPredicted RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 POLR2GP62487 172 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLN8-212ENST00000637083 ZADH2Q8N4Q0 377 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 LFNGQ8NES3 379 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 RNASE11Q8TAA1 199 aaKnown RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 IL1F10Q8WWZ1 152 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 LSM10Q969L4 123 aaKnown RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 WFDC1Q9HC57 220 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 PLSCR4Q9NRQ2 329 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 MBNL3Q9NUK0 354 aaKnown RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 LIN7CQ9NUP9 197 aaKnown RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 CACFD1Q9UGQ2 172 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 A0A1W2PR80 420 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 NUPL2O15504 423 aaKnown RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 ADCYAP1P18509 176 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 WT1P19544 449 aaPredicted RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 ARHGDIBP52566 201 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 RPL23AP62750 156 aaKnown RBP10.28□□□□□ -0.76
CLN8-212ENST00000637083 P2RY6Q15077 328 aa10.28□□□□□ -0.76
CLN8-212ENST00000637083 WDR86Q86TI4 376 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms