RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
PTPN11-205ENST00000635625 DLL3Q9NYJ7 618 aa10.55□□□□□ -0.72
PTPN11-205ENST00000635625 PURGQ9UJV8 347 aaKnown RBP10.55□□□□□ -0.72
PTPN11-205ENST00000635625 TRAV17A0A0B4J275 112 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 IQCF6A8MYZ5 107 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 CD5P06127 495 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 CA6P23280 308 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 UCP2P55851 309 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 NMSQ5H8A3 153 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 OR2T2Q6IF00 324 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 Q6ZRG5 221 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 FAM219AQ8IW50 185 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 OR2C3Q8N628 320 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 DMBX1Q8NFW5 382 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 OR8G5Q8NG78 346 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 OR52M1Q8NGK5 317 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 HRH4Q9H3N8 390 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 PLEKHF2Q9H8W4 249 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 OBP2BQ9NPH6 170 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 LYRM2Q9NU23 88 aaPredicted RBP10.54□□□□□ -0.72
PTPN11-205ENST00000635625 MED13Q9UHV7 2174 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 ZNF407Q9C0G0 2248 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.54□□□□□ -0.72
PTPN11-205ENST00000635625 UMAD1C9J7I0 102 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 HOXC12P31275 282 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 CD200P41217 278 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 ERVK11-1P61568 191 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 VAMP2P63027 116 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPN11-205ENST00000635625 TSC22D1Q15714 1073 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 ZNF324BQ6AW86 544 aaPredicted RBP10.54□□□□□ -0.72
PTPN11-205ENST00000635625 Q6P435 159 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 FAM122CQ6P4D5 195 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 ATRAIDQ6UW56 229 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 PCSK4Q6UW60 755 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 C17orf78Q8N4C9 275 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 LILRB1Q8NHL6 650 aaPredicted RBP10.54□□□□□ -0.72
PTPN11-205ENST00000635625 ERGIC1Q969X5 290 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 SARAFQ96BY9 339 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 ADAT1Q9BUB4 502 aaKnown RBP10.54□□□□□ -0.72
PTPN11-205ENST00000635625 SMDT1Q9H4I9 107 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 NDRG3Q9UGV2 375 aa10.54□□□□□ -0.72
PTPN11-205ENST00000635625 DNAJC13O75165 2243 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 IGKV1-6A0A0C4DH72 117 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 NKX2-6A6NCS4 301 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 RNASEK-C17orf49H0YIS7 233 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 ZNF205O95201 554 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 H2AFB1P0C5Y9 115 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 PGA5P0DJD9 388 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 CBR1P16152 277 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 ADCYAP1P18509 176 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 COX5AP20674 150 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 IGHV1-2P23083 117 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 F2RP25116 425 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 EIF2S3P41091 472 aaKnown RBP10.53□□□□□ -0.72
PTPN11-205ENST00000635625 ZNF146Q15072 292 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 DHRS7BQ6IAN0 325 aaPredicted RBP10.53□□□□□ -0.72
PTPN11-205ENST00000635625 ZNF497Q6ZNH5 498 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 PUSL1Q8N0Z8 303 aaKnown RBP10.53□□□□□ -0.72
PTPN11-205ENST00000635625 IL36RNQ9UBH0 155 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 KPTNQ9Y664 436 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 SHANK1Q9Y566 2161 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 AKAP13Q12802 2813 aa10.53□□□□□ -0.72
PTPN11-205ENST00000635625 IGKV1D-13A0A0B4J2D9 117 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 A0A1B0GU03 582 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 A0A1B0GW64 132 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 RNF212BA8MTL3 300 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 TOR1AO14656 332 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 SH2D1BO14796 132 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 HSPA12AO43301 675 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 PGLYRP1O75594 196 aaPredicted RBP10.52□□□□□ -0.72
PTPN11-205ENST00000635625 TSPAN15O95858 294 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 HEXAP06865 529 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 IGKV1-13P0DP09 117 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 ZNF44P15621 663 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 MUC1P15941 1255 aaPredicted RBP10.52□□□□□ -0.72
PTPN11-205ENST00000635625 ID4P47928 161 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 ID3Q02535 119 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 PEA15Q15121 130 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 MSMO1Q15800 293 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 OR10V1Q8NGI7 309 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 LSM10Q969L4 123 aaKnown RBP10.52□□□□□ -0.72
PTPN11-205ENST00000635625 SMIM3Q9BZL3 60 aa10.52□□□□□ -0.72
PTPN11-205ENST00000635625 LIN7CQ9NUP9 197 aaKnown RBP10.52□□□□□ -0.72
PTPN11-205ENST00000635625 TPRP12270 2363 aaKnown RBP10.52□□□□□ -0.73
PTPN11-205ENST00000635625 BTBD17A6NE02 478 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.52□□□□□ -0.73
PTPN11-205ENST00000635625 CAMLGP49069 296 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 MZT1Q08AG7 82 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 ATP1A1-AS1Q5TC04 95 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 BATF2Q8N1L9 274 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 BOLLQ8N9W6 283 aaKnown RBP10.52□□□□□ -0.73
PTPN11-205ENST00000635625 SCCPDHQ8NBX0 429 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 RDH5Q92781 318 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 GNPNAT1Q96EK6 184 aaPredicted RBP10.52□□□□□ -0.73
PTPN11-205ENST00000635625 PBDC1Q9BVG4 233 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 ASCL3Q9NQ33 180 aa10.52□□□□□ -0.73
PTPN11-205ENST00000635625 CCL28Q9NRJ3 127 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms