RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 RNASE2P10153 161 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SFTPCP11686 197 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CCL2P13500 99 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ETS2P15036 469 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF250P15622 560 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF708P17019 499 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 GGT1P19440 569 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 OGNP20774 298 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CPN2P22792 545 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CRYGSP22914 178 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 F2RP25116 425 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RPL22P35268 128 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SRP14P37108 136 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TALDO1P37837 337 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 OPRK1P41145 380 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 YAP1P46937 504 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 HCAR3P49019 387 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 HNMTP50135 292 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RAB7AP51149 207 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 IDH3GP51553 393 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 P2RX1P51575 399 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RAP1GDS1P52306 607 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 GBX2P52951 348 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PRRX1P54821 245 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 FOXA1P55317 472 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TAS2R39P59534 338 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 UBE2HP62256 183 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SNRPFP62306 86 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 LCN6P62502 163 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RPL38P63173 70 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 LCN2P80188 198 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF117Q03924 483 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 FMODQ06828 376 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 FUT5Q11128 374 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 BAMBIQ13145 260 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF266Q14584 549 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ITIH4Q14624 930 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TAF1AQ15573 450 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TOMM34Q15785 309 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 HADHQ16836 314 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PGGHGQ32M88 737 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 KRTAP21-3Q3LHN1 58 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ANKDD1AQ495B1 522 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 VPS26BQ4G0F5 336 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 HIKESHIQ53FT3 197 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 MPV17L2Q567V2 206 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM201AQ5SY85 155 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CCDC183Q5T5S1 534 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PRR9Q5T870 116 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CARD17Q5XLA6 110 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 DUPD1Q68J44 220 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 FAM45BPQ6NSW5 357 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 C10orf99Q6UWK7 81 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TMEM107Q6UX40 140 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CASP12Q6UXS9 341 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RTL4Q6ZR62 310 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZCCHC23Q6ZST2 131 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 NDUFAF7Q7L592 441 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 H2BFWTQ7Z2G1 175 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 NANOGNBQ7Z5D8 188 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 MRPL55Q7Z7F7 128 aaKnown RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 COMTD1Q86VU5 262 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC13A5Q86YT5 568 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TBC1D21Q8IYX1 336 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CLECL1Q8IZS7 167 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TMEM256Q8N2U0 113 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC35F6Q8N357 371 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SIGLECL1Q8N7X8 197 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZFP41Q8N8Y5 198 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZDHHC22Q8N966 263 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZFP62Q8NB50 900 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 NECAP1Q8NC96 275 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 SPATA4Q8NEY3 305 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 OR7G2Q8NG99 324 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 OR4K17Q8NGC6 315 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 OR52R1Q8NGF1 315 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 OR5D16Q8NGK9 328 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 OR10R2Q8NGX6 335 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 OR10D3Q8NH80 312 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CLDND2Q8NHS1 167 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PIFOQ8TCI5 191 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 GPR119Q8TDV5 335 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 C15orf40Q8WUR7 153 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 EEF1AKMT1Q8WVE0 214 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 HGDQ93099 445 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 YIPF5Q969M3 257 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TMBIM1Q969X1 311 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RERGQ96A58 199 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CIDECQ96AQ7 238 aaPredicted RBP0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 MS4A6EQ96DS6 147 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 NEURL3Q96EH8 262 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 WDR34Q96EX3 536 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CHMP6Q96FZ7 201 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 CERS2Q96G23 380 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 COQ2Q96H96 371 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 PKNOX2Q96KN3 472 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF488Q96MN9 340 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 RNF145Q96MT1 663 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 BIRC8Q96P09 236 aa0.59□□□□□ -2.31
SMARCB1-209ENST00000635578 TSGA13Q96PP4 275 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms