RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CCDC141Q6ZP82 1450 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZSWIM8A7E2V4 1837 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 HECW2Q9P2P5 1572 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SMARCA4P51532 1647 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 A0A087WWV3 80 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 A0A0G2JLM5 398 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 A0A0X1KG70 313 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 TEX50A0A1B0GTY4 177 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 A0A1B0GWB2 263 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SIGLEC16A6NMB1 481 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 MPTX1A8MV57 137 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 LEUTXA8MZ59 168 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SMIM1B2RUZ4 78 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 EEF1E1-BLOC1S5C9J1V9 151 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 H7C417 338 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 CORTO00230 105 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 EEF1E1O43324 174 aaKnown RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 GNG7O60262 68 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 LMX1BO60663 402 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 NPIPB7O75200 414 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 MMP23AO75900 390 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZFAND5O76080 213 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SLC2A10O95528 541 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 MOSP00540 346 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 PSG2P11465 335 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 CXCL2P19875 107 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 TCN2P20062 427 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 RPS3P23396 243 aaKnown RBP eCLIP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZBTB25P24278 435 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 NPY1RP25929 384 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 PSMB9P28065 219 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 BLVRBP30043 206 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 MARCKSL1P49006 195 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 HERV-K104P61576 105 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 GNG5P63218 68 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 TNFAIP6P98066 277 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 TAB1Q15750 504 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 NEDD8Q15843 81 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 KRTAP24-1Q3LI83 254 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 KIAA1644Q3SXP7 199 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 HSD17B12Q53GQ0 312 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF684Q5T5D7 378 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 STPG1Q5TH74 334 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 RSBN1Q5VWQ0 802 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SPATA31B1PQ5VZV4 182 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SLC35E4Q6ICL7 350 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF343Q6P1L6 599 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM207Q6UWW9 146 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 GDPGP1Q6ZNW5 385 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 Q6ZSR6 202 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF767PQ75MW2 155 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF550Q7Z398 422 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SLC22A15Q8IZD6 547 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SLC22A18ASQ8N1D0 253 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 STPG4Q8N801 248 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SLC35G3Q8N808 338 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 OR11H6Q8NGC7 330 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 OR5A1Q8NGJ0 315 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 OR52E2Q8NGJ4 325 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 OR10R2Q8NGX6 335 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 TERB2Q8NHR7 220 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 DCAKDQ8WVC6 231 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 OR5P3Q8WZ94 311 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ARL11Q969Q4 196 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 FMC1Q96HJ9 113 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 GMPPAQ96IJ6 420 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SLC35G5Q96KT7 338 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 FAM19A4Q96LR4 140 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ATOH8Q96SQ7 321 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 MCHR1Q99705 422 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 KIR2DL4Q99706 377 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF649Q9BS31 505 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 TM2D1Q9BX74 207 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SUCNR1Q9BXA5 334 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 OR51E2Q9H255 320 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 IFI27L2Q9H2X8 130 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 CST9LQ9H4G1 147 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF71Q9NQZ8 489 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 C14orf105Q9NVL8 296 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 DNAJC27Q9NZQ0 273 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 RPS6KB2Q9UBS0 482 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 RSL24D1Q9UHA3 163 aaKnown RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 RIMS3Q9UJD0 308 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 SSR3Q9UNL2 185 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 BTRCQ9Y297 605 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 PKIGQ9Y2B9 76 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 YTHDF2Q9Y5A9 579 aaKnown RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 RFNGQ9Y644 331 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ADGBQ8N7X0 1667 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ECM29Q5VYK3 1845 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 PTPRTO14522 1441 aa2.33□□□□□ -2.04
PSPC1-208ENST00000635562 TROQ12816 1431 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-208ENST00000635562 ZFYVE16Q7Z3T8 1539 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 DNMT1P26358 1616 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 CUL7Q14999 1698 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 KIF21AQ7Z4S6 1674 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 A0A087WYN8 130 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 TRAV8-4A0A0B4J246 113 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 FAM236DA0A1B0GTK5 79 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 hADV38S2A0JD32 116 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms