RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CCDC144NLQ6NUI1 221 aa10.31□□□□□ -0.76
SHPRH-211ENST00000629427 MYOZ3Q8TDC0 251 aa10.31□□□□□ -0.76
SHPRH-211ENST00000629427 MRGPRFQ96AM1 343 aa10.31□□□□□ -0.76
SHPRH-211ENST00000629427 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
SHPRH-211ENST00000629427 OR2J1Q9GZK6 312 aa10.31□□□□□ -0.76
SHPRH-211ENST00000629427 ZNF552Q9H707 407 aaPredicted RBP10.31□□□□□ -0.76
SHPRH-211ENST00000629427 ANXA10Q9UJ72 324 aa10.31□□□□□ -0.76
SHPRH-211ENST00000629427 PATJQ8NI35 1801 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 TMEM210A6NLX4 147 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 FGF9P31371 208 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-211ENST00000629427 TFPI2P48307 235 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 LYRM7Q5U5X0 104 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 LIMS2Q7Z4I7 341 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 OR10D4PQ8NGN7 298 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 STARD4Q96DR4 205 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 SLC52A3Q9NQ40 469 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 MFSD2BA6NFX1 497 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 GZMKP49863 264 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 GUCA2BQ16661 112 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 Q6ZN92 141 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 ANGPTL6Q8NI99 470 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 EID2BQ96D98 161 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 TTTY12Q9BZ98 90 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 TMEM140Q9NV12 185 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 SCAND1P57086 179 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 KHDC3LQ587J8 217 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 WDR73Q6P4I2 378 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PRNTQ86SH4 94 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 MS4A10Q96PG2 267 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 DIRC2Q96SL1 478 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 NPAS1Q99742 590 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 TMEM38BQ9NVV0 291 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 THADAQ6YHU6 1953 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 C11orf94C9JXX5 98 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 GPR6P46095 362 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PPOXP50336 477 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 ATG4DQ86TL0 474 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PRNDQ9UKY0 176 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PPIAL4EA0A075B759 164 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PPIAL4DF5H284 164 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 CLDN34H7C241 214 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 SYNGR2O43760 224 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PPIAL4FP0DN26 164 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 CEBPDP49716 269 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-211ENST00000629427 TMEM33P57088 247 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 CCL8P80075 99 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 IL24Q13007 206 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 FAM24BQ8N5W8 94 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PRDM14Q9GZV8 571 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PPIAL4AQ9Y536 164 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 ROM1Q03395 351 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 PLAURQ03405 335 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 OR1L8Q8NGR8 309 aa10.3□□□□□ -0.76
SHPRH-211ENST00000629427 H3BVH4 76 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 CRISP2P16562 243 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 KIR3DL2P43630 455 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 HLA-DRB3P79483 266 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SLC25A42Q86VD7 318 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 ABCA7Q8IZY2 2146 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 LOC389332A0A1B0GUA5 103 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 RBFOX3A6NFN3 312 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 ERVFRD-1P60508 538 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SPANXN1Q5VSR9 72 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 OR5A2Q8NGI9 324 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 OIT3Q8WWZ8 545 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 GHITMQ9H3K2 345 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SPINT1O43278 529 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 DLX1P56177 255 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 PSG6Q00889 435 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 ZNF841Q6ZN19 808 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 CLRN3Q8NCR9 226 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 OR1L6Q8NGR2 347 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SNRNP40Q96DI7 357 aaKnown RBP10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SHANK3Q9BYB0 1731 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 KIF26BQ2KJY2 2108 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 TRAV39A0A0B4J263 110 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 A0A1W2PPE3 182 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 ADAP1O75689 374 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 TTRP02766 147 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 MPV17LQ2QL34 196 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SLIRPQ9GZT3 109 aaKnown RBP10.29□□□□□ -0.76
SHPRH-211ENST00000629427 OR51B2Q9Y5P1 312 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SYNGR1O43759 233 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SLC35B1P78383 322 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 ANKRD55Q3KP44 614 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 PRSS54Q6PEW0 395 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 BHLHA9Q7RTU4 235 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 DTD1Q8TEA8 209 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 ANKRD20A5PA0PJZ0 165 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 PPYP01298 95 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 TWIST1Q15672 202 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 TCTEX1D1Q8N7M0 179 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 OR1K1Q8NGR3 316 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 RPS4Y2Q8TD47 263 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 DYRK2Q92630 601 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 CCL28Q9NRJ3 127 aa10.29□□□□□ -0.76
SHPRH-211ENST00000629427 SCN4AP35499 1836 aa10.28□□□□□ -0.76
SHPRH-211ENST00000629427 SS18L1O75177 396 aaPredicted RBP10.28□□□□□ -0.76
SHPRH-211ENST00000629427 KIR2DL1P43626 348 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms