RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 RAB40CQ96S21 281 aa3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 TP53RKQ96S44 253 aa3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 FAAP24Q9BTP7 215 aa3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 ZNF160Q9HCG1 818 aa3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 GLRX2Q9NS18 164 aa3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 OR6C3Q9NZP0 311 aa3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 POLR1DQ9Y2S0 133 aa3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 MRPS18CQ9Y3D5 142 aaKnown RBP3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 ASCC3Q8N3C0 2202 aaKnown RBP3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 CABIN1Q9Y6J0 2220 aa3.59□□□□□ -1.83
PTP4A1-205ENST00000626021 LNP1A1A4G5 178 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 B4DGG1 531 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 E9PLN8 166 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 H3BMH7 237 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 TP53I11O14683 189 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 TLX3O43711 291 aaPredicted RBP3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 TRAF3IP2O43734 574 aaPredicted RBP3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 KBTBD11O94819 623 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 VENTXO95231 258 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 PPYP01298 95 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 CST2P09228 141 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 GZMHP20718 246 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 AADACP22760 399 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 CEBPGP53567 150 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 HNRNPKP61978 463 aaKnown RBP eCLIP3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 RANP62826 216 aaKnown RBP3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 LCN2P80188 198 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 HERPUD1Q15011 391 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 BSXQ3C1V8 233 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 PHLDA2Q53GA4 152 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 C1orf189Q5VU69 101 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 ZNF66Q6ZN08 573 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 C16orf82Q7Z2V1 217 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 THNSL2Q86YJ6 484 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 GBGT1Q8N5D6 347 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 NAXEQ8NCW5 288 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 AGBL5Q8NDL9 886 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 Q8NFD4 153 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 OR5D18Q8NGL1 313 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 OR5L1Q8NGL2 311 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 OR5D13Q8NGL4 314 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 REEP6Q96HR9 211 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 C20orf144Q9BQM9 153 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 HDHD3Q9BSH5 251 aaPredicted RBP3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 EMC6Q9BV81 110 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 STRADBQ9C0K7 418 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 RPRMQ9NS64 109 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 COPS7AQ9UBW8 275 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 PRSS50Q9UI38 385 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 UBE2J1Q9Y385 318 aaPredicted RBP3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 RNF115Q9Y4L5 304 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 TIMM9Q9Y5J7 89 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 RFNGQ9Y644 331 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 KIAA2026Q5HYC2 2103 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 GON4LQ3T8J9 2241 aa3.59□□□□□ -1.84
PTP4A1-205ENST00000626021 CHD3Q12873 2000 aaKnown RBP3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 MAP1LC3B2A6NCE7 125 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 CCDC85CA6NKD9 419 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 C17orf51A8MQB3 221 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 K7ESF4 209 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 RER1O15258 196 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 TOX3O15405 576 aaPredicted RBP3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 CHST1O43916 411 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 EFNA2O43921 213 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 PDCD6O75340 191 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 TNFSF13O75888 250 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 HRASP01112 189 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 CTXN2P0C2S0 81 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 OR4A8P0C604 315 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 ESDP10768 282 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 GNRHRP30968 328 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 OPRM1P35372 400 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 GALR1P47211 349 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 ASCL1P50553 236 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 CNN1P51911 297 aaKnown RBP3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 RRADP55042 308 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 FBXW4P57775 412 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 FXYD4P59646 89 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 RPL23P62829 140 aaKnown RBP3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 PAFAH1B2P68402 229 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 MRPS11P82912 194 aaKnown RBP3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 MFAP5Q13361 173 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 RSPO1Q2MKA7 263 aaPredicted RBP3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 LRRC75BQ2VPJ9 315 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 TMEM41BQ5BJD5 291 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 TMEM42Q69YG0 159 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 ALKBH2Q6NS38 261 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 ZNF880Q6PDB4 577 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 OSR2Q8N2R0 312 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 OR11L1Q8NGX0 322 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 SCGB1C1Q8TD33 95 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 TMEM54Q969K7 222 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 PIGTQ969N2 578 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 LIN37Q96GY3 246 aaPredicted RBP3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 TMEM208Q9BTX3 173 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 MAP1LC3BQ9GZQ8 125 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 PLK3Q9H4B4 646 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 ZNF665Q9H7R5 613 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 CHODLQ9H9P2 273 aa3.58□□□□□ -1.84
PTP4A1-205ENST00000626021 GPR173Q9NS66 373 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms