RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 MUL1Q969V5 352 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 ORAI1Q96D31 301 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 PGLYRP3Q96LB9 341 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 C8orf49Q96NF6 230 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 OR14A2Q96R54 314 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 NKX3-1Q99801 234 aaPredicted RBP5.17□□□□□ -1.58
TCF4-249ENST00000625716 DPCDQ9BVM2 203 aaPredicted RBP5.17□□□□□ -1.58
TCF4-249ENST00000625716 CDCA4Q9BXL8 241 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 NPFFR1Q9GZQ6 430 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 CCDC90BQ9GZT6 254 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 NCOR1P1Q9H4R4 102 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 ZNF696Q9H7X3 374 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 IL36GQ9NZH8 169 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 DPM3Q9P2X0 92 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 KIF25Q9UIL4 384 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 MRPS28Q9Y2Q9 187 aaKnown RBP5.17□□□□□ -1.58
TCF4-249ENST00000625716 HILPDAQ9Y5L2 63 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 STAB1Q9NY15 2570 aa5.17□□□□□ -1.58
TCF4-249ENST00000625716 TRAV8-7A0A075B6U6 113 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 TRBV5-7A0A0A0MS05 114 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 TRAV24A0A0B4J272 114 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 KBTBD11-OT1A0A1B0GTJ5 212 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 TMEM30CPA0ZSE6 113 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 FAM172BPA6NC97 362 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 VGLL3A8MV65 326 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 MCRIP1C9JLW8 97 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 GEMIN2O14893 280 aaKnown RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 RGS10O43665 173 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 CRTAPO75718 401 aaPredicted RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 HSMCR30P0CW71 290 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 IGFBP3P17936 291 aaPredicted RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 GZMHP20718 246 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 MYF6P23409 242 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 MNDAP41218 407 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 RAB13P51153 203 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 RBM11P57052 281 aaKnown RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 RPS11P62280 158 aaKnown RBP eCLIP5.16□□□□□ -1.58
TCF4-249ENST00000625716 RPL11P62913 178 aaKnown RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 SPHARQ15513 63 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 MPV17LQ2QL34 196 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 ACSM3Q53FZ2 586 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 NHLRC3Q5JS37 347 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 RNLSQ5VYX0 342 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 GLT8D1Q68CQ7 371 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 LAIR2Q6ISS4 152 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 CCDC144NLQ6NUI1 221 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 IZUMO2Q6UXV1 221 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 Q6ZTK2 550 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 TCF23Q7RTU1 214 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 NKAIN3Q8N8D7 197 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 SUMF2Q8NBJ7 301 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 ZNF485Q8NCK3 441 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 Q8NFD4 153 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 OR9G1Q8NH87 305 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 MRGPRDQ8TDS7 321 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 NRG4Q8WWG1 115 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 UFD1Q92890 307 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 ANAPC16Q96DE5 110 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 MRPS24Q96EL2 167 aaKnown RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 COQ2Q96H96 371 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 AJUBAQ96IF1 538 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 AKR1E2Q96JD6 320 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 DERL3Q96Q80 235 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 TMED9Q9BVK6 235 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 PRSS22Q9GZN4 317 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 CST11Q9H112 138 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 PPIL3Q9H2H8 161 aaKnown RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 RANBP3Q9H6Z4 567 aaPredicted RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 IFT22Q9H7X7 185 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 SPACA1Q9HBV2 294 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 RAB9BQ9NP90 201 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 FKBP14Q9NWM8 211 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 IDI2-AS1Q9NZ38 188 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 TCF19Q9Y242 345 aa5.16□□□□□ -1.58
TCF4-249ENST00000625716 AMMECR1Q9Y4X0 333 aaPredicted RBP5.16□□□□□ -1.58
TCF4-249ENST00000625716 A6NDX4 124 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 AIPO00170 330 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 MMP23AO75900 390 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 UBBP0CG47 229 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 KIR2DS4P43632 304 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 DYNLT3P51808 116 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 PROK1P58294 105 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 SRSF4Q08170 494 aaKnown RBP5.15□□□□□ -1.59
TCF4-249ENST00000625716 GPR50Q13585 617 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 TRAM1Q15629 374 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 LTC4SQ16873 150 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 C17orf58Q2M2W7 97 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 HSD17B12Q53GQ0 312 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 RBM48Q5RL73 367 aaKnown RBP5.15□□□□□ -1.59
TCF4-249ENST00000625716 RSBN1Q5VWQ0 802 aaPredicted RBP5.15□□□□□ -1.59
TCF4-249ENST00000625716 SLC16A12Q6ZSM3 486 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 CEACAM19Q7Z692 300 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 TMEM219Q86XT9 240 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 DYNAPQ8N1N2 210 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 OR10A7Q8NGE5 316 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 OR4P4Q8NGL7 312 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 OR13A1Q8NGR1 328 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 RFESDQ8TAC1 157 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 PLPPR1Q8TBJ4 325 aa5.15□□□□□ -1.59
TCF4-249ENST00000625716 CCDC107Q8WV48 283 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms