RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 TGIF2LXQ8IUE1 241 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 SYS1Q8N2H4 156 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 OR5M8Q8NGP6 311 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 CCDC107Q8WV48 283 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 ARL11Q969Q4 196 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 GON7Q9BXV9 100 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 ABCG5Q9H222 651 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 AMBNQ9NP70 447 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 TAS2R4Q9NYW5 299 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 ST3GAL6Q9Y274 331 aa14.9□□□□□ -0.02
SMN1-211ENST00000625245 SDCBPO00560 298 aaPredicted RBP14.89□□□□□ -0.03
SMN1-211ENST00000625245 EI24O14681 340 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 CIB2O75838 187 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 OR7C1O76099 320 aaPredicted RBP14.89□□□□□ -0.03
SMN1-211ENST00000625245 GZMHP20718 246 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 ECI1P42126 302 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 PAX5Q02548 391 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 C9orf66Q5T8R8 295 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 Q8N9W7 124 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 OR8U1Q8NH10 309 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 PYDC1Q8WXC3 89 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 RASL11BQ9BPW5 248 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 LIN7CQ9NUP9 197 aaKnown RBP14.89□□□□□ -0.03
SMN1-211ENST00000625245 ERVK13-1Q9NX77 482 aa14.89□□□□□ -0.03
SMN1-211ENST00000625245 IGHV3-43A0A0B4J1X8 118 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 TMEM30CPA0ZSE6 113 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 FADS2O95864 444 aaKnown RBP14.88□□□□□ -0.03
SMN1-211ENST00000625245 IGHV3-43DP0DP04 118 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 IL3RAP26951 378 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 MRPL28Q13084 256 aaKnown RBP14.88□□□□□ -0.03
SMN1-211ENST00000625245 KIR2DS1Q14954 304 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 ATAD3CQ5T2N8 411 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 FAM53AQ6NSI3 398 aaPredicted RBP14.88□□□□□ -0.03
SMN1-211ENST00000625245 ASCL4Q6XD76 172 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 IZUMO1Q8IYV9 350 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 Q8N6K4 173 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 Q8NFD4 153 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 NEK7Q8TDX7 302 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 ASCL2Q99929 193 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 METTL9Q9H1A3 318 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 LSM4Q9Y4Z0 139 aaKnown RBP14.88□□□□□ -0.03
SMN1-211ENST00000625245 GMPPBQ9Y5P6 360 aa14.88□□□□□ -0.03
SMN1-211ENST00000625245 SEC14L6B5MCN3 397 aa14.87□□□□□ -0.03
SMN1-211ENST00000625245 RRP9O43818 475 aaKnown RBP14.87□□□□□ -0.03
SMN1-211ENST00000625245 CSTBP04080 98 aaKnown RBP14.87□□□□□ -0.03
SMN1-211ENST00000625245 GTF2A1P52655 376 aaPredicted RBP14.87□□□□□ -0.03
SMN1-211ENST00000625245 FOXE3Q13461 319 aa14.87□□□□□ -0.03
SMN1-211ENST00000625245 ZNF529Q6P280 563 aa14.87□□□□□ -0.03
SMN1-211ENST00000625245 OR52N1Q8NH53 320 aa14.87□□□□□ -0.03
SMN1-211ENST00000625245 S1PR3Q99500 378 aa14.87□□□□□ -0.03
SMN1-211ENST00000625245 S100A13Q99584 98 aa14.87□□□□□ -0.03
SMN1-211ENST00000625245 JAM3Q9BX67 310 aa14.87□□□□□ -0.03
SMN1-211ENST00000625245 GFOD1Q9NXC2 390 aa14.87□□□□□ -0.03
SMN1-211ENST00000625245 ZNF736B4DX44 427 aaPredicted RBP14.86□□□□□ -0.03
SMN1-211ENST00000625245 C15orf65H3BRN8 121 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 GEMIN2O14893 280 aaKnown RBP14.86□□□□□ -0.03
SMN1-211ENST00000625245 ATP5HO75947 161 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 MOSP00540 346 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 ELANEP08246 267 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 SERPINA2P20848 420 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 CD1BP29016 333 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 CDX1P47902 265 aaPredicted RBP14.86□□□□□ -0.03
SMN1-211ENST00000625245 ALDH3A2P51648 485 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 RBM11P57052 281 aaKnown RBP14.86□□□□□ -0.03
SMN1-211ENST00000625245 LINC00311Q8N616 119 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 OR52M1Q8NGK5 317 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 RTN4IP1Q8WWV3 396 aaPredicted RBP14.86□□□□□ -0.03
SMN1-211ENST00000625245 RGP1Q92546 391 aaPredicted RBP14.86□□□□□ -0.03
SMN1-211ENST00000625245 RBMXL1Q96E39 390 aaKnown RBP14.86□□□□□ -0.03
SMN1-211ENST00000625245 Q96MT0 163 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 PLSCR3Q9NRY6 295 aa14.86□□□□□ -0.03
SMN1-211ENST00000625245 CD2P06729 351 aa14.85□□□□□ -0.03
SMN1-211ENST00000625245 GABRB1P18505 474 aa14.85□□□□□ -0.03
SMN1-211ENST00000625245 VDAC1P21796 283 aa14.85□□□□□ -0.03
SMN1-211ENST00000625245 NKAPLQ5M9Q1 402 aa14.85□□□□□ -0.03
SMN1-211ENST00000625245 DDI2Q5TDH0 399 aa14.85□□□□□ -0.03
SMN1-211ENST00000625245 OR52I1Q8NGK6 324 aa14.85□□□□□ -0.03
SMN1-211ENST00000625245 GPR148Q8TDV2 347 aa14.85□□□□□ -0.03
SMN1-211ENST00000625245 IFT22Q9H7X7 185 aa14.85□□□□□ -0.03
SMN1-211ENST00000625245 SOX6P35712 828 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 ZNF93P35789 620 aaPredicted RBP14.84□□□□□ -0.03
SMN1-211ENST00000625245 F2RL1P55085 397 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 PPP3R1P63098 170 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 RAB40BQ12829 278 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 CBR4Q8N4T8 237 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 RNF152Q8N8N0 203 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 C8orf31Q8N9H6 132 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 TMEM104Q8NE00 496 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 ST6GALNAC6Q969X2 333 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 TMEM106AQ96A25 262 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 HSPB9Q9BQS6 159 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 IL36GQ9NZH8 169 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 SCOCQ9UIL1 159 aa14.84□□□□□ -0.03
SMN1-211ENST00000625245 SIRT4Q9Y6E7 314 aaPredicted RBP14.84□□□□□ -0.03
SMN1-211ENST00000625245 SORL1Q92673 2214 aa14.83□□□□□ -0.04
SMN1-211ENST00000625245 AIPO00170 330 aa14.83□□□□□ -0.04
SMN1-211ENST00000625245 SLC31A2O15432 143 aa14.83□□□□□ -0.04
SMN1-211ENST00000625245 ORC5O43913 435 aa14.83□□□□□ -0.04
SMN1-211ENST00000625245 MT-ND4P03905 459 aa14.83□□□□□ -0.04
SMN1-211ENST00000625245 ZNF260Q3ZCT1 412 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms