RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MED30Q96HR3 178 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 DNTTIP1Q9H147 329 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 C20orf85Q9H1P6 137 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 WDR13Q9H1Z4 485 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 SCP2D1Q9UJQ7 156 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ETV7Q9Y603 341 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 U3KQ87 197 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 TRAV8-7A0A075B6U6 113 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 ZNF878C9JN71 531 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 PSMD9O00233 223 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 PRAF2O60831 178 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 ANXA2P07355 339 aaKnown RBP6.35□□□□□ -1.39
CLK1-215ENST00000621181 CD28P10747 220 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 AMY2BP19961 511 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 CD33P20138 364 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 PAX6P26367 422 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 HSD11B1P28845 292 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 KIR3DL2P43630 455 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 SCAND1P57086 179 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 MRPS10P82664 201 aaKnown RBP6.35□□□□□ -1.39
CLK1-215ENST00000621181 FAM3AP98173 230 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 PLA2G7Q13093 441 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 HABP2Q14520 560 aaPredicted RBP6.35□□□□□ -1.39
CLK1-215ENST00000621181 GFOD2Q3B7J2 385 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 NDUFA11Q86Y39 141 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 PRSS35Q8N3Z0 413 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 BEST4Q8NFU0 473 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 OR2G2Q8NGZ5 317 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 SLAMF6Q96DU3 332 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 REEP6Q96HR9 211 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 MNTQ99583 582 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 MICU1Q9BPX6 476 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 ZNF436Q9C0F3 470 aaPredicted RBP6.35□□□□□ -1.39
CLK1-215ENST00000621181 LIN7BQ9HAP6 207 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 FLVCR2Q9UPI3 526 aa6.35□□□□□ -1.39
CLK1-215ENST00000621181 SIGLEC5O15389 551 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 CHST1O43916 411 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 ZNF254O75437 659 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 OR2A4O95047 310 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 TFF1P04155 84 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 IL5P05113 134 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 VSIG8P0DPA2 414 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 CDK2P24941 298 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 GABRA2P47869 451 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 CX3CR1P49238 355 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 LGALS4P56470 323 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 CLDN12P56749 244 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 TAS2R20P59543 309 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 GRB2P62993 217 aaKnown RBP6.34□□□□□ -1.39
CLK1-215ENST00000621181 AANATQ16613 207 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.39
CLK1-215ENST00000621181 CRIP3Q6Q6R5 217 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 ZNF788Q6ZQV5 615 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 ELMOD2Q8IZ81 293 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 FAM185AQ8N0U4 392 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 UXS1Q8NBZ7 420 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 ZNRF1Q8ND25 227 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 CSNK2A3Q8NEV1 391 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 TMEM185AQ8NFB2 350 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 OR10AC1Q8NH08 325 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 THEM6Q8WUY1 208 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 GAFA1Q96PS6 74 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 OR2A7Q96R45 310 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 AMELYQ99218 206 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 CITED2Q99967 270 aaPredicted RBP6.34□□□□□ -1.39
CLK1-215ENST00000621181 RTL8AQ9BWD3 113 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 TLNRD1Q9H1K6 362 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 MEGF9Q9H1U4 602 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 ELL3Q9HB65 397 aaPredicted RBP6.34□□□□□ -1.39
CLK1-215ENST00000621181 DIABLOQ9NR28 239 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 KLK11Q9UBX7 282 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 ZNF222Q9UK12 451 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 RHBDD3Q9Y3P4 386 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 TENM3Q9P273 2699 aa6.34□□□□□ -1.39
CLK1-215ENST00000621181 hCG_38984A0A1B0GV85 526 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 OR2AT4A6NND4 320 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 SHOXO15266 292 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 NDUFB6O95139 128 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 ACAA1P09110 424 aaPredicted RBP6.34□□□□□ -1.4
CLK1-215ENST00000621181 VEGFCP49767 419 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 GSK3AP49840 483 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 DEFB121Q5J5C9 76 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 HCP5Q6MZN7 132 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 C11orf87Q6NUJ2 197 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 GLDNQ6ZMI3 551 aaPredicted RBP6.34□□□□□ -1.4
CLK1-215ENST00000621181 FAM57BQ71RH2 274 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 SERPINA12Q8IW75 414 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 OR8H1Q8NGG4 311 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 OR52H1Q8NGJ2 320 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 OR5AK2Q8NH90 309 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 FCAMRQ8WWV6 532 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 SGK3Q96BR1 496 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 S100A16Q96FQ6 103 aaKnown RBP6.34□□□□□ -1.4
CLK1-215ENST00000621181 SERTAD4Q9NUC0 356 aa6.34□□□□□ -1.4
CLK1-215ENST00000621181 TRBV23-1A0A0A0MS06 115 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 A0A1W2PRX2 142 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 TMEM210A6NLX4 147 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 TMEM212A6NML5 194 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 SNRPGP15A8MWD9 76 aa6.33□□□□□ -1.4
CLK1-215ENST00000621181 XRCC3O43542 346 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms