RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 CDH20Q9HBT6 801 aa18.16■□□□□ 0.5
SGMS1-210ENST00000619438 RCC2Q9P258 522 aaKnown RBP18.16■□□□□ 0.5
SGMS1-210ENST00000619438 ANKRD30BLA7E2S9 258 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 ZNF732B4DXR9 585 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 BCL2L11O43521 198 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 IFNA2P01563 188 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 LYL1P12980 280 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 HAAOP46952 286 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 GPM6AP51674 278 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 AP2S1P53680 142 aaPredicted RBP18.15■□□□□ 0.5
SGMS1-210ENST00000619438 CLEC12BQ2HXU8 276 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 TBC1D28Q2M2D7 210 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 LINC00596Q86U02 117 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 COMMD7Q86VX2 200 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 RDH8Q9NYR8 311 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 KANTRA0A1W2PQU2 76 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 CRYM-AS1A6NIL9 109 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 IGHV4-39P01824 125 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 BCL3P20749 454 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 UCP3P55916 312 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 SWI5Q1ZZU3 235 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 MST1LQ2TV78 715 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 THOC7Q6I9Y2 204 aaKnown RBP18.15■□□□□ 0.5
SGMS1-210ENST00000619438 C18orf12Q96KH6 178 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 VRK1Q99986 396 aaPredicted RBP18.15■□□□□ 0.5
SGMS1-210ENST00000619438 PLK3Q9H4B4 646 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 NF1P21359 2839 aa18.15■□□□□ 0.5
SGMS1-210ENST00000619438 C13orf42A0A1B0GVH6 325 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 OR7C1O76099 320 aaPredicted RBP18.14■□□□□ 0.49
SGMS1-210ENST00000619438 NMBP08949 121 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 FOSL1P15407 271 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 P2RX3P56373 397 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 LRRC37A5PQ49AS3 106 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 FBXW12Q6X9E4 464 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 SGPP2Q8IWX5 399 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 INO80EQ8NBZ0 244 aaPredicted RBP18.14■□□□□ 0.49
SGMS1-210ENST00000619438 C2orf50Q96LR7 162 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 RHOFQ9HBH0 211 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 C1orf123Q9NWV4 160 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 MBD2Q9UBB5 411 aa18.14■□□□□ 0.49
SGMS1-210ENST00000619438 NIPBLQ6KC79 2804 aaeCLIP18.14■□□□□ 0.49
SGMS1-210ENST00000619438 GLRXP35754 106 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 RPS23P62266 143 aaKnown RBP18.13■□□□□ 0.49
SGMS1-210ENST00000619438 GNG3P63215 75 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 IL15RAQ13261 267 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 ALKAL2Q6UX46 152 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 ZNF573Q86YE8 665 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 ST8SIA2Q92186 375 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 SLAMF9Q96A28 289 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 PHYHIPLQ96FC7 376 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 RNF126Q9BV68 326 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 PKIBQ9C010 78 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 MTCH1Q9NZJ7 389 aa18.13■□□□□ 0.49
SGMS1-210ENST00000619438 TRAPPC2LH3BP13 241 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 H7C1Q1 480 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 EFNB3Q15768 340 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 RGS7BPQ6MZT1 257 aaPredicted RBP18.12■□□□□ 0.49
SGMS1-210ENST00000619438 GTF3AQ92664 365 aaKnown RBP18.12■□□□□ 0.49
SGMS1-210ENST00000619438 OR51B6Q9H340 312 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 FBXO9Q9UK97 447 aaPredicted RBP18.12■□□□□ 0.49
SGMS1-210ENST00000619438 SMAD7O15105 426 aaKnown RBP18.12■□□□□ 0.49
SGMS1-210ENST00000619438 ADAP1O75689 374 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 KNG1P01042 644 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 ZNF728P0DKX0 622 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 RBMXP38159 391 aaKnown RBP18.12■□□□□ 0.49
SGMS1-210ENST00000619438 IL24Q13007 206 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 POC1AQ8NBT0 407 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 DYRK2Q92630 601 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 GALNT14Q96FL9 552 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 MARS2Q96GW9 593 aaKnown RBP18.12■□□□□ 0.49
SGMS1-210ENST00000619438 SPACA1Q9HBV2 294 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 DUSP13Q9UII6 198 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 ZFHX3Q15911 3703 aa18.12■□□□□ 0.49
SGMS1-210ENST00000619438 NAPSAO96009 420 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 GLAP06280 429 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 PRSS54Q6PEW0 395 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 BRICD5Q6PL45 260 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 Q6ZPA2 131 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 MOB3AQ96BX8 217 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 SLC25A32Q9H2D1 315 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 METTL8Q9H825 291 aaKnown RBP18.11■□□□□ 0.49
SGMS1-210ENST00000619438 DYNLRB1Q9NP97 96 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 ZANQ9Y493 2812 aa18.11■□□□□ 0.49
SGMS1-210ENST00000619438 TEX13DA0A0J9YY54 714 aaPredicted RBP18.1■□□□□ 0.49
SGMS1-210ENST00000619438 GLP1RP43220 463 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 EFNA4P52798 201 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 UCP2P55851 309 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 SELENOVP59797 346 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 IL13RA2Q14627 380 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 AANATQ16613 207 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 TOR2AQ5JU69 321 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 CIARTQ8N365 385 aaPredicted RBP18.1■□□□□ 0.49
SGMS1-210ENST00000619438 PCNPQ8WW12 178 aaKnown RBP18.1■□□□□ 0.49
SGMS1-210ENST00000619438 MRPL24Q96A35 216 aaKnown RBP18.1■□□□□ 0.49
SGMS1-210ENST00000619438 WDR13Q9H1Z4 485 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 FZR1Q9UM11 496 aa18.1■□□□□ 0.49
SGMS1-210ENST00000619438 hCG_1807616A0A1W2PRN6 198 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 SPDEFO95238 335 aa18.09■□□□□ 0.49
SGMS1-210ENST00000619438 F12P00748 615 aaPredicted RBP18.09■□□□□ 0.49
SGMS1-210ENST00000619438 PET100P0DJ07 73 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms