RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ZNF295-AS1Q8N0V1 137 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 LINC00469Q8N7U9 141 aa17.45■□□□□ 0.38
NEK3-208ENST00000618534 HBE1P02100 147 aa17.44■□□□□ 0.38
NEK3-208ENST00000618534 FOLR3P41439 243 aa17.44■□□□□ 0.38
NEK3-208ENST00000618534 TMEM267Q0VDI3 215 aaPredicted RBP17.44■□□□□ 0.38
NEK3-208ENST00000618534 THNSL2Q86YJ6 484 aa17.44■□□□□ 0.38
NEK3-208ENST00000618534 REPIN1Q9BWE0 567 aaKnown RBP17.44■□□□□ 0.38
NEK3-208ENST00000618534 ATP23Q9Y6H3 246 aa17.44■□□□□ 0.38
NEK3-208ENST00000618534 GLIPR1P48060 266 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 SPNS3Q6ZMD2 512 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 SLC35E3Q7Z769 313 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 TNRC6BQ9UPQ9 1833 aaKnown RBP17.43■□□□□ 0.38
NEK3-208ENST00000618534 A0A096LPE4 126 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 LOC102723971A0A1B0GUV8 181 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 A0A1W2PPZ6 126 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 CYTIPO60759 359 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 SPINK2P20155 84 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 IZUMO4Q1ZYL8 232 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 KHDC3LQ587J8 217 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 CDPF1Q6NVV7 123 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 C20orf204Q6ZNR8 217 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 STX12Q86Y82 276 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 IL22RA2Q969J5 263 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 SIRT7Q9NRC8 400 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 DEPPQ9NTK1 212 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 GNG13Q9P2W3 67 aa17.43■□□□□ 0.38
NEK3-208ENST00000618534 CYB5BO43169 146 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BKO60814 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BJP06899 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BOP23527 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BBP33778 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BDP58876 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BCP62807 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 Q0VFX4 171 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 OR8G1Q15617 311 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST2H2BEQ16778 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 MPV17LQ2QL34 196 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 OR2B11Q5JQS5 317 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.42■□□□□ 0.38
NEK3-208ENST00000618534 PCSK4Q6UW60 755 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 DPPA3Q6W0C5 159 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 ZDHHC23Q8IYP9 409 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 SAXO1Q8IYX7 474 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 OR51H1Q8NH63 302 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BHQ93079 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 GPR146Q96CH1 333 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BNQ99877 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIST1H2BMQ99879 126 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 HIPK2Q9H2X6 1198 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 DMRT1Q9Y5R6 373 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 ZNF407Q9C0G0 2248 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 CXorf65A6NEN9 183 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 TRAPPC2LH3BP13 241 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 F2RP25116 425 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 ARF1P84077 181 aaKnown RBP17.42■□□□□ 0.38
NEK3-208ENST00000618534 CEACAM21Q3KPI0 293 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 SLC25A24Q6NUK1 477 aa17.42■□□□□ 0.38
NEK3-208ENST00000618534 C5orf49A4QMS7 147 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 SYNGR1O43759 233 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 F10P00742 488 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 GDF1P27539 372 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 S100A2P29034 98 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 HLA-DRB3P79483 266 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 MRPL21Q7Z2W9 205 aaKnown RBP17.41■□□□□ 0.38
NEK3-208ENST00000618534 MRPL30Q8TCC3 161 aaKnown RBP17.41■□□□□ 0.38
NEK3-208ENST00000618534 GAR1Q9NY12 217 aaKnown RBP17.41■□□□□ 0.38
NEK3-208ENST00000618534 PINLYPA6NC86 204 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 C3orf80F5H4A9 247 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 DFFBO76075 338 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 HLA-HP01893 362 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 TRGC2P03986 189 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 CTXN2P0C2S0 81 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 CLDN23Q96B33 292 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 ZNF488Q96MN9 340 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 RSG1Q9BU20 258 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 NOSIPQ9Y314 301 aaKnown RBP17.41■□□□□ 0.38
NEK3-208ENST00000618534 FREM1Q5H8C1 2179 aa17.41■□□□□ 0.38
NEK3-208ENST00000618534 KIAA1324LA8MWY0 1029 aaPredicted RBP17.4■□□□□ 0.38
NEK3-208ENST00000618534 IFNA5P01569 189 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 PSG2P11465 335 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 RAB11AP62491 216 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 OTX2P32243 289 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 CD200P41217 278 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 RNPS1Q15287 305 aaKnown RBP17.4■□□□□ 0.38
NEK3-208ENST00000618534 FAM90A2PQ658T7 463 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 MKXQ8IYA7 352 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 TDHQ8IZJ6 230 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 ZNF552Q9H707 407 aaPredicted RBP17.4■□□□□ 0.38
NEK3-208ENST00000618534 FREM2Q5SZK8 3169 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 VPS13AQ96RL7 3174 aa17.4■□□□□ 0.38
NEK3-208ENST00000618534 TRAV1-1A0A0B4J248 108 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 ZNF503-AS2A6NEH8 195 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 ZFP92A6NM28 416 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 MRPL33O75394 65 aaKnown RBP17.39■□□□□ 0.37
NEK3-208ENST00000618534 FOXG1P55316 489 aaPredicted RBP17.39■□□□□ 0.37
NEK3-208ENST00000618534 C9orf152Q5JTZ5 239 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 GFI1BQ5VTD9 330 aa17.39■□□□□ 0.37
NEK3-208ENST00000618534 ZNF324BQ6AW86 544 aaPredicted RBP17.39■□□□□ 0.37
NEK3-208ENST00000618534 PRRG4Q9BZD6 226 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms