RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 IL36GQ9NZH8 169 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 RCC2Q9P258 522 aaKnown RBP3.46□□□□□ -1.86
SNCA-213ENST00000618500 RNF150Q9ULK6 438 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 DHDHQ9UQ10 334 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 PSG11Q9UQ72 335 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 KIR2DL5BA0A0G2JN68 375 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 KIR2DL5BA0A0G2JPC4 375 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 F8VVB4 439 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 F8VWA3 439 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 C15orf65H3BRN8 121 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 ATP6V0E1O15342 81 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 CCNB2O95067 398 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 HMGN1P05114 100 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 HSD17B1P14061 328 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 ATF1P18846 271 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 GZMHP20718 246 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 HES1Q14469 280 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 GFOD2Q3B7J2 385 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 SLC35F1Q5T1Q4 408 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 FDX2Q6P4F2 183 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 ASCL4Q6XD76 172 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 KIR2DL5AQ8N109 375 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 ZNF565Q8N9K5 539 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 PXT1Q8NFP0 134 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 OR6K6Q8NGW6 343 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 KIR2DL5BQ8NHK3 375 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 UTP4Q969X6 686 aaKnown RBP3.46□□□□□ -1.86
SNCA-213ENST00000618500 MCUR1Q96AQ8 359 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 NEURL2Q9BR09 285 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 TSSK6Q9BXA6 273 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 MROQ9BYG7 248 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 MFFQ9GZY8 342 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 NEK6Q9HC98 313 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 SAR1AQ9NR31 198 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 PEMTQ9UBM1 199 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 LAMP5Q9UJQ1 280 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 OR52A1Q9UKL2 312 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 U3KQV3 271 aa3.46□□□□□ -1.86
SNCA-213ENST00000618500 A0A0G2JLM5 398 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 LGALS9O00182 355 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 TPPPO94811 219 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 UBCP0CG48 685 aaKnown RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 BCL3P20749 454 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 RRM2P31350 389 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 RBP2P50120 134 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 MAGOHP61326 146 aaKnown RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 CDK5Q00535 292 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 PDZK1IP1Q13113 114 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 TMED1Q13445 227 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 LSAMPQ13449 338 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 UBE2V2Q15819 145 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 C5orf64Q2M2E5 130 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 GLT8D1Q68CQ7 371 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 OR10X1Q8NGY0 326 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 CPNE2Q96FN4 548 aaPredicted RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 KCTD14Q9BQ13 255 aaPredicted RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 CADM1Q9BY67 442 aaKnown RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 KLK15Q9H2R5 256 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 SLC2A8Q9NY64 477 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 DNAJC27Q9NZQ0 273 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 TRAV25A0A0B4J276 109 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 ITGB1BP1O14713 200 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 RGS13O14921 159 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 NBR2O15453 112 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 SELENOFO60613 162 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 SULT1C4O75897 302 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 CLUP10909 449 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 EGR2P11161 476 aaPredicted RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 PRKACAP17612 351 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 BLVRBP30043 206 aaPredicted RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 GLP1RP43220 463 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 ALDH3A2P51648 485 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 TMEM267Q0VDI3 215 aaPredicted RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 MICAQ29983 383 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 LGALS9BQ3B8N2 356 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 ZNF343Q6P1L6 599 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 ZNF833PQ6ZTB9 187 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 ASRGL1Q7L266 308 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 TEX47Q8TBZ9 253 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 BORCS8Q96FH0 119 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 USMG5Q96IX5 58 aa3.45□□□□□ -1.86
SNCA-213ENST00000618500 PPIL3Q9H2H8 161 aaKnown RBP3.45□□□□□ -1.86
SNCA-213ENST00000618500 NCBP2LA6PVI3 153 aaKnown RBP3.44□□□□□ -1.86
SNCA-213ENST00000618500 FAM229AH3BQW9 127 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 GLAP06280 429 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 NUDT2P50583 147 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 ZNF45Q02386 682 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 TATDN3Q17R31 274 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 SLC25A26Q70HW3 274 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 TRMT10AQ8TBZ6 339 aaKnown RBP3.44□□□□□ -1.86
SNCA-213ENST00000618500 THEM6Q8WUY1 208 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 RGP1Q92546 391 aaPredicted RBP3.44□□□□□ -1.86
SNCA-213ENST00000618500 BTBD10Q9BSF8 475 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 RETNQ9HD89 108 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 RBFOX1Q9NWB1 397 aaKnown RBP3.44□□□□□ -1.86
SNCA-213ENST00000618500 LINC00527Q9UJ94 153 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 SERPINA3P01011 423 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 GASTP01350 101 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 RAB6AP20340 208 aa3.44□□□□□ -1.86
SNCA-213ENST00000618500 AESQ08117 197 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms