RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TBL2Q9Y4P3 447 aaKnown RBP13.32□□□□□ -0.28
COL5A1-208ENST00000618395 A0A0U1RQS6 177 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 A0A1B0GU03 582 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 A0A1W2PRS3 328 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 CA6P23280 308 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 PRSS38A1L453 326 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 GTSF1LQ9H1H1 148 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 TRAV8-4A0A0B4J246 113 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 LYZP61626 148 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 SRSF5Q13243 272 aaKnown RBP13.32□□□□□ -0.28
COL5A1-208ENST00000618395 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 BCL2L10Q9HD36 194 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 THYN1Q9P016 225 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 UBE2CO00762 179 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 GDF9O60383 454 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 NDUFB4O95168 129 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 OR10V1Q8NGI7 309 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 DLEU1O43261 78 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 ZXDAP98168 799 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 OTPQ5XKR4 325 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 MS4A6EQ96DS6 147 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 KCNE5Q9UJ90 142 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-208ENST00000618395 H3BUT2 72 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF770Q6IQ21 691 aaPredicted RBP13.31□□□□□ -0.28
COL5A1-208ENST00000618395 SLURP2P0DP57 97 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 TIMM23BQ5SRD1 257 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 OLIG3Q7RTU3 272 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 LAMTOR5O43504 91 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 CFDP00746 253 aaPredicted RBP13.31□□□□□ -0.28
COL5A1-208ENST00000618395 EIF3IQ13347 325 aaKnown RBP13.31□□□□□ -0.28
COL5A1-208ENST00000618395 TXNRD2Q9NNW7 524 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF391Q9UJN7 358 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 FCGR3BO75015 233 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 HOXA5P20719 270 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 ADAD2Q8NCV1 583 aaKnown RBP13.31□□□□□ -0.28
COL5A1-208ENST00000618395 SSMEM1Q8WWF3 244 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 PRELID3AQ96N28 172 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 FGF5P12034 268 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 SLC25A1P53007 311 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 GCSAMLQ5JQS6 135 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 KHDC1LQ5JSQ8 128 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 LINC01553A4QN01 128 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF79Q15937 498 aa13.31□□□□□ -0.28
COL5A1-208ENST00000618395 PPIAL4DF5H284 164 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 TPTE2P1Q5T6R2 138 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 TSPO2Q5TGU0 170 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 HOXA4Q00056 320 aaPredicted RBP13.3□□□□□ -0.28
COL5A1-208ENST00000618395 BIVMQ86UB2 503 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 MPZL1O95297 269 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 NTHL1P78549 312 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 C10orf113Q5VZT2 155 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 ABHD17CQ6PCB6 329 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 WDR31Q8NA23 367 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 QTRT1Q9BXR0 403 aaKnown RBP13.3□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF665Q9H7R5 613 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 C5P01031 1676 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 TEPPQ6URK8 271 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 Q6ZSR6 202 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 TMEM101Q96IK0 257 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF48Q96MX3 618 aaPredicted RBP13.3□□□□□ -0.28
COL5A1-208ENST00000618395 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 TMEFF1Q8IYR6 380 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 FBXL14Q8N1E6 418 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 FOXC2Q99958 501 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 RPS23P62266 143 aaKnown RBP13.3□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF750Q32MQ0 723 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 TCF24Q7RTU0 167 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 PRNTQ86SH4 94 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 OR1F12Q8NHA8 337 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 MOB4Q9Y3A3 225 aa13.3□□□□□ -0.28
COL5A1-208ENST00000618395 TRAV39A0A0B4J263 110 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 NPTNQ9Y639 398 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 H0YL77 283 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 WDR38Q5JTN6 314 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 TJP1Q07157 1748 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 B4GALNT1Q00973 533 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
COL5A1-208ENST00000618395 FAM71F2Q6NXP2 309 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 TRDCB7Z8K6 153 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 LINC00869P0C866 280 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 RPS27P42677 84 aaKnown RBP13.29□□□□□ -0.28
COL5A1-208ENST00000618395 TMEM45BQ96B21 275 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 ZPBPQ9BS86 351 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 OR11H1Q8NG94 326 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 OR11H2Q8NH07 326 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 ATRXP46100 2492 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 NR2C2APQ86WQ0 139 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 OR4D5Q8NGN0 318 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 ABHD14AQ9BUJ0 271 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 CISD1Q9NZ45 108 aaKnown RBP13.29□□□□□ -0.28
COL5A1-208ENST00000618395 B9D1Q9UPM9 204 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 GJB3O75712 270 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 NPPBP16860 134 aa13.29□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF324BQ6AW86 544 aaPredicted RBP13.29□□□□□ -0.28
COL5A1-208ENST00000618395 TTC9CQ8N5M4 171 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms