RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 SIGLEC7Q9Y286 467 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 A0A1B0GU03 582 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 HMX2A2RU54 273 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 NKX2-6A6NCS4 301 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 TMEM127O75204 238 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 CTLA4P16410 223 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 GPR3P46089 330 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 BEND2Q8NDZ0 799 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 DEFB124Q8NES8 71 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 MS4A4AQ96JQ5 239 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 RECKO95980 971 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 DDB2Q92466 427 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 AQP10Q96PS8 301 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 NEU1Q99519 415 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 LINC00470Q9BZP3 86 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 F12P00748 615 aaPredicted RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 SOX8P57073 446 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 FAM219BQ5XKK7 198 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 RHBDD2Q6NTF9 364 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 TMEM136Q6ZRR5 245 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 CHRNA10Q9GZZ6 450 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 CLN8Q9UBY8 286 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 A0A1B0GTL3 188 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 CEACAM5P06731 702 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 B4GALNT1Q00973 533 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 EWSR1Q01844 656 aaKnown RBP eCLIP5.28□□□□□ -1.56
RFX3-212ENST00000617270 SPINK14Q6IE38 97 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 TDHQ8IZJ6 230 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 OR4B1Q8NGF8 309 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 OR8B12Q8NGG6 310 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 RNF133Q8WVZ7 376 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 COL25A1Q9BXS0 654 aaPredicted RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 SIRT7Q9NRC8 400 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 PSG2P11465 335 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 TMEM95Q3KNT9 176 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 ZNF385CQ66K41 422 aaPredicted RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 C12orf73Q69YU5 71 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 TMEM211Q6ICI0 200 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 C16orf47Q6ZP98 133 aaPredicted RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 FAM169BQ8N8A8 192 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 ZFP64Q9NPA5 681 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 PHLDA3Q9Y5J5 127 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 SYNGR1O43759 233 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 FCGR2BP31994 310 aaPredicted RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 HYAL1Q12794 435 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 NSUN5P2Q63ZY6 315 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 ZNF770Q6IQ21 691 aaPredicted RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 CA10Q9NS85 328 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 HYPMO75409 117 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 TGFAP01135 160 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 SRFP11831 508 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 PNLIPP16233 465 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 CD81P60033 236 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 ZNF56Q15929 161 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 Q6ZS52 159 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 ADAMTS5Q9UNA0 930 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 PRF1P14222 555 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 HMGA1P17096 107 aaKnown RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 CRYBB2P43320 205 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 NXPH1P58417 271 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 YBX1P67809 324 aaKnown RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 PSG6Q00889 435 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 C12orf54Q6X4T0 127 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 CYB561D1Q8N8Q1 229 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 NT5CQ8TCD5 201 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 ST6GAL2Q96JF0 529 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 GHITMQ9H3K2 345 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 GEMIN7Q9H840 131 aaKnown RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 TMEFF2Q9UIK5 374 aaPredicted RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 SPTY2D1-AS1A0A0U1RR47 76 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 CTXND1A0A1B0GTU2 59 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 LDLRAD4O15165 306 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 CRHP06850 196 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 CDKN2AP42771 156 aaKnown RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 FAM3BP58499 235 aaPredicted RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 GUSBP11Q6P575 273 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 ANKRD37Q7Z713 158 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 MRGPRGQ86SM5 289 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 LSM10Q969L4 123 aaKnown RBP5.28□□□□□ -1.56
RFX3-212ENST00000617270 RAX2Q96IS3 184 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 RNF7Q9UBF6 113 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 HILPDAQ9Y5L2 63 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 ZNF318Q5VUA4 2279 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 MYH13Q9UKX3 1938 aa5.28□□□□□ -1.56
RFX3-212ENST00000617270 TMEM262E9PQX1 116 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 OR2A4O95047 310 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 HBZP02008 142 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 HOXC4P09017 264 aaPredicted RBP5.27□□□□□ -1.57
RFX3-212ENST00000617270 SPEM1Q8N4L4 309 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 OR2A7Q96R45 310 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 ZNF665Q9H7R5 613 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 SLC6A13Q9NSD5 602 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 MPC1Q9Y5U8 109 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 PARP4Q9UKK3 1724 aaKnown RBP5.27□□□□□ -1.57
RFX3-212ENST00000617270 FAM74A7A6NL05 159 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 VDAC1P21796 283 aa5.27□□□□□ -1.57
RFX3-212ENST00000617270 CDX1P47902 265 aaPredicted RBP5.27□□□□□ -1.57
RFX3-212ENST00000617270 RBM11P57052 281 aaKnown RBP5.27□□□□□ -1.57
RFX3-212ENST00000617270 SMAD4Q13485 552 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms