RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 ZNF546Q86UE3 836 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 NEK7Q8TDX7 302 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 A6NNC1 897 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 HIST1H1BP16401 226 aaKnown RBP13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 FUT3P21217 361 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 OR5P3Q8WZ94 311 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 GP6Q9HCN6 339 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 COMMD9Q9P000 198 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 ZDHHC8Q9ULC8 765 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 FZR1Q9UM11 496 aa13.3□□□□□ -0.28
SEMA3B-212ENST00000616701 TRAPPC2LH3BP13 241 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 HSPA12AO43301 675 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 SFT2D2O95562 160 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 TAS2R31P59538 309 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 PKIAP61925 76 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 RTL6Q6ICC9 239 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 Q6ZT83 130 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 PEG10Q86TG7 708 aaKnown RBP13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 ZNF610Q8N9Z0 462 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 EXTL1Q92935 676 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 HIST1H2BAQ96A08 127 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 WDR13Q9H1Z4 485 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 HOXB5P09067 269 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 PTGER4P35408 488 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 RAB5CP51148 216 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 PPP1CBP62140 327 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 HOXA4Q00056 320 aaPredicted RBP13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 FAHD2BQ6P2I3 314 aaPredicted RBP13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 OR5L1Q8NGL2 311 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 SLC25A40Q8TBP6 338 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 FAHD2AQ96GK7 314 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 TMEM208Q9BTX3 173 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 COL25A1Q9BXS0 654 aaPredicted RBP13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 DKK4Q9UBT3 224 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 SH3BGRL2Q9UJC5 107 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 GAB2Q9UQC2 676 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 HS3ST1O14792 307 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 PHOX2AO14813 284 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 CA11O75493 328 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 IGHV2-5P01817 119 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 FOXC1Q12948 553 aa13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 C14orf166Q9Y224 244 aaKnown RBP13.29□□□□□ -0.28
SEMA3B-212ENST00000616701 BSNQ9UPA5 3926 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 RPA2P15927 270 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 GUSBP1Q15486 140 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 C1orf185Q5T7R7 199 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 LPCAT3Q6P1A2 487 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 CXorf67Q86X51 503 aaPredicted RBP13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 MKXQ8IYA7 352 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 OR5A2Q8NGI9 324 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 OR1J1Q8NGS3 322 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 PLSCR2Q9NRY7 297 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 FCGR2CP31995 323 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 PHLDA2Q53GA4 152 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 LBHQ53QV2 105 aaPredicted RBP13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 SNIP1Q8TAD8 396 aaKnown RBP13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 RDH5Q92781 318 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 METTL8Q9H825 291 aaKnown RBP13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 NECAP2Q9NVZ3 263 aa13.28□□□□□ -0.28
SEMA3B-212ENST00000616701 CD8AP01732 235 aa13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 MPV17P39210 176 aa13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 NDUFA6P56556 154 aa13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 FGF12P61328 243 aa13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 UBA52P62987 128 aaKnown RBP13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 SP6Q3SY56 376 aa13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 Q5PR19 223 aa13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 SEM1Q6ZVN7 128 aa13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 SCGB3A2Q96PL1 93 aa13.27□□□□□ -0.28
SEMA3B-212ENST00000616701 CEACAM18A8MTB9 384 aa13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 H0YL77 283 aa13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 RPS2P15880 293 aaKnown RBP13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 DTYMKP23919 212 aa13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 HOXC12P31275 282 aa13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 C11orf87Q6NUJ2 197 aa13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 HEATR1Q9H583 2144 aaKnown RBP13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 ZNF286AQ9HBT8 521 aa13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 FAM96BQ9Y3D0 163 aa13.27□□□□□ -0.29
SEMA3B-212ENST00000616701 TEX13DA0A0J9YY54 714 aaPredicted RBP13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 DLEU1O43261 78 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 WDR1O75083 606 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 CD200P41217 278 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 GNG3P63215 75 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 WDR86Q86TI4 376 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 RBMXL3Q8N7X1 1067 aaKnown RBP13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 WDR31Q8NA23 367 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 FAM122AQ96E09 287 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 OR10C1Q96KK4 312 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 GAR1Q9NY12 217 aaKnown RBP13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 GSKIPQ9P0R6 139 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 DAOP14920 347 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 F2RL1P55085 397 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 RNF151Q2KHN1 245 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 PIGMQ9H3S5 423 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 CADP27708 2225 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 IFITM10A6NMD0 228 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 TNFSF13O75888 250 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 LUMP51884 338 aaPredicted RBP13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 UCP2P55851 309 aa13.26□□□□□ -0.29
SEMA3B-212ENST00000616701 MRPL49Q13405 166 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms