RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 CISD2Q8N5K1 135 aaKnown RBP11.35□□□□□ -0.59
PPP4R3B-206ENST00000616407 C22orf15Q8WYQ4 148 aa11.35□□□□□ -0.59
PPP4R3B-206ENST00000616407 MOB3AQ96BX8 217 aa11.35□□□□□ -0.59
PPP4R3B-206ENST00000616407 CIB3Q96Q77 187 aaPredicted RBP11.35□□□□□ -0.59
PPP4R3B-206ENST00000616407 OSGIN2Q9Y236 505 aa11.35□□□□□ -0.59
PPP4R3B-206ENST00000616407 TMEM218A2RU14 115 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 CD8AP01732 235 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 FOXG1P55316 489 aaPredicted RBP11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 ZNF787Q6DD87 383 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 HPSE2Q8WWQ2 592 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 DLL3Q9NYJ7 618 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 ATPIF1Q9UII2 106 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 AMDHD2Q9Y303 409 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 UBE2L5PA0A1B0GUS4 154 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 LDLRAD4O15165 306 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 PSMB3P49720 205 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 NHLH2Q02577 135 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 CSRP2Q16527 193 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 TMEM108Q6UXF1 575 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 MOGAT3Q86VF5 341 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 ARV1Q9H2C2 271 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 PSG2P11465 335 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 TNFRSF1AP19438 455 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 TNFSF10P50591 281 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 DYNLT3P51808 116 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 LINC00596Q86U02 117 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 RNF122Q9H9V4 155 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 PNRC2Q9NPJ4 139 aaKnown RBP11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 POLEQ07864 2286 aa11.34□□□□□ -0.59
PPP4R3B-206ENST00000616407 FAM90A10PA6NDY2 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A18PA6NE21 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A16PA6NEW6 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A20PA6NIJ5 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A8PA6NJQ4 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A7PA6NKC0 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A22PA8MWA6 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A12PA8MX19 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A5PA8MXJ8 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A23PA8MXZ1 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 CYB5BO43169 146 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A15PP0C7V4 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A13PP0C7W8 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A14PP0C7W9 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A24PP0C7X0 464 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 CBR1P16152 277 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 NKX6-1P78426 367 aaPredicted RBP11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 EWSR1Q01844 656 aaKnown RBP eCLIP11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 UQCC1Q9NVA1 299 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 AHRRA9YTQ3 701 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 SYNGR2O43760 224 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR2H2O95918 312 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 APOA2P02652 100 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 ADIRFQ15847 76 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 SPINK9Q5DT21 86 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 SIGLEC5O15389 551 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 MBPP02686 304 aaPredicted RBP11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 ZNF154Q13106 437 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 C2CD4CQ8TF44 421 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
PPP4R3B-206ENST00000616407 OOEPA6NGQ2 149 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR5H1A6NKK0 313 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 MPTX1A8MV57 137 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 F2RP25116 425 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 NAAAQ02083 359 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 LYG1Q8N1E2 194 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 WNT2BQ93097 391 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 TMEM210A6NLX4 147 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 CDRT15L2A8MXV6 281 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 CRYGSP22914 178 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 CEBPDP49716 269 aaPredicted RBP11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 GNG10P50151 68 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 KLF14Q8TD94 323 aaPredicted RBP11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 RTBDNQ9BSG5 229 aaPredicted RBP11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 GPR37O15354 613 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 SRSF10O75494 262 aaKnown RBP11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 P2RY6Q15077 328 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 NRN1LQ496H8 165 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 LY6G6FQ5SQ64 297 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 MRPL41Q8IXM3 137 aaKnown RBP11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM89BQ8N5H3 189 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR10X1Q8NGY0 326 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 CCL17Q92583 94 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 Q9N2K0 584 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 DEDDO75618 318 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 GABRA6Q16445 453 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 HIST3H3Q16695 136 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 EIF2S3LQ2VIR3 472 aaKnown RBP11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 RTN4RL2Q86UN3 420 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 COMMD1Q8N668 190 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 ADAMTS17Q8TE56 1095 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 TMEM222Q9H0R3 208 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 NDRG3Q9UGV2 375 aa11.32□□□□□ -0.6
PPP4R3B-206ENST00000616407 TRAV14DV4A0A0A6YYC5 116 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 TRIM77I1YAP6 450 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms