RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 NME2P1O60361 137 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 C1QL1O75973 258 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 NXPH2O95156 264 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 NFYBP25208 207 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 NPBWR1P48145 328 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 SOX8P57073 446 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 MOB3AQ96BX8 217 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 RCL1Q9Y2P8 373 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 PLP2Q04941 152 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 OR2T2Q6IF00 324 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 EIF5AL1Q6IS14 154 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 RBMS3Q6XE24 437 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 LGI3Q8N145 548 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 ZNF561Q8N587 486 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 APOBEC3DQ96AK3 386 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 MSI2Q96DH6 328 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 WFDC1Q9HC57 220 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 PLSCR4Q9NRQ2 329 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 WASF3Q9UPY6 502 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 RFNGQ9Y644 331 aa11.9□□□□□ -0.5
CACNA1C-231ENST00000616390 IGKV3D-15A0A087WSY6 115 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 C3orf85A0A1B0GTC6 90 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 NKX2-6A6NCS4 301 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 TAAR5O14804 337 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 OR8U9P0C7N5 309 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 STAG3L3P0CL85 134 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 CA6P23280 308 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 GNRHRP30968 328 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 NUTF2P61970 127 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 RNF212Q495C1 297 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 TMEM211Q6ICI0 200 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 COLCA1Q6ZS62 124 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 TBC1D26Q86UD7 250 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 MKXQ8IYA7 352 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 OR8U1Q8NH10 309 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 SH3BGRL3Q9H299 93 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 SEBOXQ9HB31 216 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 IL36GQ9NZH8 169 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 XKRY2A2RUG3 117 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 E5RGE8 158 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 MPPED1O15442 326 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 JTBO76095 146 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 SP1P08047 785 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 RD3LP0DJH9 198 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 CDC34P49427 236 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 CAV2P51636 162 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 CLINT1Q14677 625 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 CEACAM21Q3KPI0 293 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 HES3Q5TGS1 186 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 ZNF695Q8IW36 515 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 IL1F10Q8WWZ1 152 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 TCEAL7Q9BRU2 100 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 GPR87Q9BY21 358 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 PURGQ9UJV8 347 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 NSG2Q9Y328 171 aa11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 RP1L1Q8IWN7 2480 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-231ENST00000616390 CD300LBA8K4G0 201 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 HSPA12AO43301 675 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 PRH1P02810 166 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 TK1P04183 234 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 AKR1C3P42330 323 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 PMP22Q01453 160 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 GAPTQ8N292 157 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 GALNT14Q96FL9 552 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 SUCNR1Q9BXA5 334 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 IGKV1D-13A0A0B4J2D9 117 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 RNASEK-C17orf49H0YIS7 233 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 SFTA3P0C7M3 94 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 IGKV1-13P0DP09 117 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 APLNRP35414 380 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 SLC10A1Q14973 349 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 CCDC71LQ8N9Z2 235 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 CCL28Q9NRJ3 127 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 ZDHHC8Q9ULC8 765 aa11.88□□□□□ -0.51
CACNA1C-231ENST00000616390 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 B9A039 149 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 C9JQL5 133 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 M0R296 226 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 ST8SIA3O43173 380 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 RHBDL1O75783 438 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 C20orf204Q6ZNR8 217 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 TECTBQ96PL2 329 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 LINC00470Q9BZP3 86 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 C22orf46C9J442 243 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 SULT1A2P50226 295 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 PPT1P50897 306 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 FGF12P61328 243 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 ARG2P78540 354 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 HERPUD1Q15011 391 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 GCNT2Q8N0V5 402 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 AKR1E2Q96JD6 320 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 POM121L2Q96KW2 1035 aa11.87□□□□□ -0.51
CACNA1C-231ENST00000616390 RHOVQ96L33 236 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms