RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 IGKV1-12A0A0C4DH73 117 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 RRP8O43159 456 aaKnown RBP10.82□□□□□ -0.68
MSH6-213ENST00000614496 ZIC3O60481 467 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 IGKV1D-12P01611 117 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 RFPL3SP0C7P2 107 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 CEACAM6P40199 344 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 ERVS71-1P61550 626 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 IL24Q13007 206 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 KCNMB1Q16558 191 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 C17orf82Q86X59 251 aaPredicted RBP10.82□□□□□ -0.68
MSH6-213ENST00000614496 RFESDQ8TAC1 157 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 LTBP2Q14767 1821 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 C3orf80F5H4A9 247 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 SYNGR2O43760 224 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 PITX3O75364 302 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 SELENOHQ8IZQ5 122 aaKnown RBP10.82□□□□□ -0.68
MSH6-213ENST00000614496 DMBX1Q8NFW5 382 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 OR10V1Q8NGI7 309 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 TMEM54Q969K7 222 aa10.82□□□□□ -0.68
MSH6-213ENST00000614496 IGKV1-27A0A075B6S5 117 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 IGHV1-45A0A0A0MS14 117 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 A0A0G2JMM0 328 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 A0A1W2PPB8 328 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 A0A1W2PRS3 328 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 KIR3DP1A8MWS1 328 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 PTGDSP41222 190 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 CATR1Q13166 79 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 C6orf15Q6UXA7 325 aaPredicted RBP10.81□□□□□ -0.68
MSH6-213ENST00000614496 GALNT14Q96FL9 552 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 PMS2P1A4D2B8 440 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 RPS23P62266 143 aaKnown RBP10.81□□□□□ -0.68
MSH6-213ENST00000614496 GNG3P63215 75 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 PDLIM3Q53GG5 364 aaPredicted RBP10.81□□□□□ -0.68
MSH6-213ENST00000614496 ZNF66Q6ZN08 573 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 OR13D1Q8NGV5 346 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 RAB40CQ96S21 281 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 OR51M1Q9H341 326 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 GNG12Q9UBI6 72 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 CER1O95813 267 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 RAB4BP61018 213 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 BATFQ16520 125 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 FGFBP3Q8TAT2 258 aa10.81□□□□□ -0.68
MSH6-213ENST00000614496 AURKAIP1Q9NWT8 199 aaPredicted RBP10.81□□□□□ -0.68
MSH6-213ENST00000614496 RNF212BA8MTL3 300 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 CYTIPO60759 359 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 ZNF737O75373 536 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 CA11O75493 328 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 NGFP01138 241 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 HEXAP06865 529 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 RPS2P15880 293 aaKnown RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 SLC38A11Q08AI6 406 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 SLC25A53Q5H9E4 307 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 ENY2Q9NPA8 101 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 LOXL2Q9Y4K0 774 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 RANBP2P49792 3224 aaKnown RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 IGHEP01854 428 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 SPEM2Q0P670 501 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 H2BFWTQ7Z2G1 175 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 TECTBQ96PL2 329 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 RTL8AQ9BWD3 113 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 ARV1Q9H2C2 271 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 LIN7CQ9NUP9 197 aaKnown RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 METTL1Q9UBP6 276 aaKnown RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 CNOT1A5YKK6 2376 aaKnown RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 IGLV3-12A0A075B6K2 115 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 DEFB108AA8MXU0 73 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 SEC14L6B5MCN3 397 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 SYNGR3O43761 229 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 FGF7P21781 194 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 MYPOPQ86VE0 399 aaPredicted RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 OR10P1Q8NGE3 313 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 RHOVQ96L33 236 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 LIME1Q9H400 295 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 RIMS4Q9H426 269 aaPredicted RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 HEYLQ9NQ87 328 aaPredicted RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 LYRM2Q9NU23 88 aaPredicted RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 SLC22A20A6NK97 555 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 IGHV3-13P01766 116 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 IGHV3-7P01780 117 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 F2RP25116 425 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 M1APQ8TC57 530 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 GPR146Q96CH1 333 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 MSI2Q96DH6 328 aaKnown RBP10.8□□□□□ -0.68
MSH6-213ENST00000614496 GGACTQ9BVM4 153 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 FER1L5A0AVI2 2057 aa10.8□□□□□ -0.68
MSH6-213ENST00000614496 CHRNA7P36544 502 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 SUCLG1P53597 346 aaKnown RBP10.79□□□□□ -0.68
MSH6-213ENST00000614496 TAS2R30P59541 319 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 TGFBR3Q03167 851 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 OR8B8Q15620 311 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 WDR25Q64LD2 544 aaPredicted RBP10.79□□□□□ -0.68
MSH6-213ENST00000614496 GCM1Q9NP62 436 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 DENND4AQ7Z401 1863 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 IGHV3-43A0A0B4J1X8 118 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 IGKV1D-13A0A0B4J2D9 117 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 IGHV3-43DP0DP04 118 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 IGKV1-13P0DP09 117 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 COX6A1P12074 109 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms