RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 CASQ2O14958 399 aaPredicted RBP18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A15PP0C7V4 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A13PP0C7W8 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A14PP0C7W9 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 FAM90A24PP0C7X0 464 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 WNT4P56705 351 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 CD83Q01151 205 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 KPRPQ5T749 579 aaPredicted RBP18.12■□□□□ 0.49
FAM228B-208ENST00000613899 OR8H3Q8N146 312 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 OR10X1Q8NGY0 326 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 OR56B4Q8NH76 319 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 MRPS24Q96EL2 167 aaKnown RBP18.12■□□□□ 0.49
FAM228B-208ENST00000613899 PLCXD1Q9NUJ7 323 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 PSORS1C1Q9UIG5 152 aa18.12■□□□□ 0.49
FAM228B-208ENST00000613899 MRPS28Q9Y2Q9 187 aaKnown RBP18.12■□□□□ 0.49
FAM228B-208ENST00000613899 TRAV39A0A0B4J263 110 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 A0A1W2PP11 408 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 A0A1W2PPI3 338 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 AMY1AP04745 511 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 AMY2AP04746 511 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 CD1AP06126 327 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 SNRNP70P08621 437 aaKnown RBP18.11■□□□□ 0.49
FAM228B-208ENST00000613899 CDH26Q8IXH8 852 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 OR4X2Q8NGF9 303 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 OR52M1Q8NGK5 317 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 FBLIM1Q8WUP2 373 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 MUL1Q969V5 352 aa18.11■□□□□ 0.49
FAM228B-208ENST00000613899 CELP19835 753 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 MAPK3P27361 379 aaPredicted RBP18.1■□□□□ 0.49
FAM228B-208ENST00000613899 DOC2BQ14184 412 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 C9orf152Q5JTZ5 239 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 AWAT2Q6E213 333 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 LAIR2Q6ISS4 152 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 GLIPR1L1Q6UWM5 242 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 DRAM1Q8N682 238 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 NKAIN3Q8N8D7 197 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 ARL11Q969Q4 196 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 DERL3Q96Q80 235 aa18.1■□□□□ 0.49
FAM228B-208ENST00000613899 RCC2Q9P258 522 aaKnown RBP18.1■□□□□ 0.49
FAM228B-208ENST00000613899 NOTCH3Q9UM47 2321 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 A0A1W2PPK0 400 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 AIPO00170 330 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 ORC5O43913 435 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 MAS1P04201 325 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 TMEM11P17152 192 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 HES1Q14469 280 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 ZNF497Q6ZNH5 498 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 BPIFB6Q8NFQ5 453 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 RAB9BQ9NP90 201 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 ERGIC3Q9Y282 383 aa18.09■□□□□ 0.49
FAM228B-208ENST00000613899 TSSC4Q9Y5U2 329 aaPredicted RBP18.09■□□□□ 0.49
FAM228B-208ENST00000613899 A0A1W2PRX2 142 aa18.08■□□□□ 0.48
FAM228B-208ENST00000613899 SH2D7A6NKC9 451 aaPredicted RBP18.08■□□□□ 0.48
FAM228B-208ENST00000613899 MCRIP1C9JLW8 97 aa18.08■□□□□ 0.48
FAM228B-208ENST00000613899 C15orf65H3BRN8 121 aa18.08■□□□□ 0.48
FAM228B-208ENST00000613899 SDCBPO00560 298 aaPredicted RBP18.08■□□□□ 0.48
FAM228B-208ENST00000613899 HSD17B6O14756 317 aa18.08■□□□□ 0.48
FAM228B-208ENST00000613899 PF4V1P10720 104 aa18.08■□□□□ 0.48
FAM228B-208ENST00000613899 ZNF816Q0VGE8 651 aaPredicted RBP18.08■□□□□ 0.48
FAM228B-208ENST00000613899 DIAPH2-AS1Q14236 149 aa18.08■□□□□ 0.48
FAM228B-208ENST00000613899 TCRBV4S1A1TA0A5B7 111 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 FAM90A10PA6NDY2 464 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 FAM90A7PA6NKC0 464 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 FAM90A23PA8MXZ1 464 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 IL3RAP26951 378 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 Q3ZCU0 254 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 REC114Q7Z4M0 266 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 LINC00311Q8N616 119 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 NANOGP1Q8N7R0 232 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 C8orf31Q8N9H6 132 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 CCDC107Q8WV48 283 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 FKBP14Q9NWM8 211 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 GFOD1Q9NXC2 390 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 ETAA1Q9NY74 926 aa18.07■□□□□ 0.48
FAM228B-208ENST00000613899 A0A1W2PPE3 182 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 CCRL2O00421 344 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 FGF16O43320 207 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 IGKV1D-33P01593 117 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 IGKV1-33P01594 117 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 MT-ND4P03905 459 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 GAPDHP04406 335 aaKnown RBP18.06■□□□□ 0.48
FAM228B-208ENST00000613899 MGMTP16455 207 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 TMEM30BQ3MIR4 351 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 TCTEX1D4Q5JR98 221 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 C6orf183Q5T699 404 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 RAB12Q6IQ22 244 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 C5orf56Q8N8D9 126 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 MYDGFQ969H8 173 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 UQCC2Q9BRT2 126 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 TRAPPC2LQ9UL33 140 aa18.06■□□□□ 0.48
FAM228B-208ENST00000613899 PIN1P1O15428 100 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 SPINT2O43291 252 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 CA11O75493 328 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 LOXL3P58215 753 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 OXLD1Q5BKU9 147 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 KHDC1LQ5JSQ8 128 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 TRAT1Q6PIZ9 186 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 LYPD6Q86Y78 171 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 TFAP2CQ92754 450 aa18.05■□□□□ 0.48
FAM228B-208ENST00000613899 MND1Q9BWT6 205 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms