RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ABHD14BQ96IU4 210 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 HOXA6P31267 233 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 SRP14P37108 136 aaKnown RBP15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 RNF122Q9H9V4 155 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 UFC1Q9Y3C8 167 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 TUBGCP6Q96RT7 1819 aa15.27■□□□□ 0.03
HMGXB3-206ENST00000613459 DAOP14920 347 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 SUCLG1P53597 346 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 OR1L8Q8NGR8 309 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 MS4A5Q9H3V2 200 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 TGIF2LYQ8IUE0 185 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 MRPL24Q96A35 216 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 DIRC2Q96SL1 478 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 FZR1Q9UM11 496 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 A0A1W2PR80 420 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 CSN3P07498 182 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 NSUN5P2Q63ZY6 315 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 FLYWCH2Q96CP2 140 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 GMPPAQ96IJ6 420 aaPredicted RBP15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 LRRC3BQ96PB8 259 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 TMEM208Q9BTX3 173 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 HELTA6NFD8 242 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 GAB4Q2WGN9 574 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 CDC42EP3Q9UKI2 254 aa15.26■□□□□ 0.03
HMGXB3-206ENST00000613459 C3orf80F5H4A9 247 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 F2RL2O00254 374 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 SERF2P84101 59 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 CCDC144NLQ6NUI1 221 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 SLC23A3Q6PIS1 610 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 SIPA1L3O60292 1781 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 SHROOM3Q8TF72 1996 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 C7orf66A4D0T2 115 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 MFSD2BA6NFX1 497 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A27PA6NNH2 459 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 TCL1AP56279 114 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 ZNF273Q14593 569 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 COL5A1-AS1Q5SY13 56 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 HES3Q5TGS1 186 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 TEPPQ6URK8 271 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 KCNMB2Q9Y691 235 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 HOXB3P14651 431 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 OR4D11Q8NGI4 311 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 MEGF10Q96KG7 1140 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 CCL28Q9NRJ3 127 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 PRR13Q9NZ81 148 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 IFITM10A6NMD0 228 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 MELTFP08582 738 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 LIFP15018 202 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 COL8A1P27658 744 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 H1FOOQ8IZA3 346 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 SLC25A33Q9BSK2 321 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 ZFP30Q9Y2G7 519 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 C5orf67F2Z3F1 127 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 VSIG8P0DPA2 414 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 VAX1Q5SQQ9 334 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 PTPMT1Q8WUK0 201 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 COA4Q9NYJ1 87 aa15.25■□□□□ 0.03
HMGXB3-206ENST00000613459 KIAA0100Q14667 2235 aaKnown RBP15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 A0A0U1RQV5 110 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 PAGE4O60829 102 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 SOX8P57073 446 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 MYOZ3Q8TDC0 251 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 RND1Q92730 232 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 SAP30LQ9HAJ7 183 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 HOXD4P09016 255 aaPredicted RBP15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 TUSC5Q8IXB3 177 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 ADAD2Q8NCV1 583 aaKnown RBP15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 ST6GALNAC2Q9UJ37 374 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 NPTNQ9Y639 398 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 A0A1W2PPV9 198 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 SNURFLB1AK76 121 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 SYNGR1O43759 233 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 GAPDHP04406 335 aaKnown RBP15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 NPY1RP25929 384 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 TMEM255AQ5JRV8 349 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 WDFY1Q8IWB7 410 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 MRPL37Q9BZE1 423 aaKnown RBP15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 CLEC5AQ9NY25 188 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 RBPMS2Q6ZRY4 209 aaKnown RBP15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 DEFB124Q8NES8 71 aa15.24■□□□□ 0.03
HMGXB3-206ENST00000613459 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A10PA6NDY2 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A18PA6NE21 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A16PA6NEW6 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A20PA6NIJ5 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A8PA6NJQ4 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A7PA6NKC0 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A22PA8MWA6 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A12PA8MX19 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A5PA8MXJ8 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A23PA8MXZ1 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 CDX4O14627 284 aaPredicted RBP15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 MPDU1O75352 247 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A15PP0C7V4 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A13PP0C7W8 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A14PP0C7W9 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 FAM90A24PP0C7X0 464 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 IER3P46695 156 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 CLDN18P56856 261 aa15.23■□□□□ 0.03
HMGXB3-206ENST00000613459 SPEM2Q0P670 501 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms