RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 GPM6AP51674 278 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 MRPL21Q7Z2W9 205 aaKnown RBP12.55□□□□□ -0.4
CDH1-213ENST00000612417 LINC00596Q86U02 117 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 SPACA3Q8IXA5 215 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 MKXQ8IYA7 352 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 TAAR6Q96RI8 345 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 TRIB1Q96RU8 372 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 SPIN2AQ99865 258 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 SPIN2BQ9BPZ2 258 aa12.55□□□□□ -0.4
CDH1-213ENST00000612417 A0A096LPE4 126 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 KIR2DS1A0A191URI9 304 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 A0A1W2PPZ6 126 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 MEX3AA1L020 520 aaKnown RBP12.54□□□□□ -0.4
CDH1-213ENST00000612417 CLEC18AA5D8T8 446 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 AQP7O14520 342 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 HLA-HP01893 362 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 CTXN2P0C2S0 81 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 ARR3P36575 388 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 KIR2DS4P43632 304 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 RAB13P51153 203 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 NHLH2Q02577 135 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 KIR2DS1Q14954 304 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 MEX3BQ6ZN04 569 aaKnown RBP12.54□□□□□ -0.4
CDH1-213ENST00000612417 TBC1D26Q86UD7 250 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 CLEC18CQ8NCF0 446 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 SARAFQ96BY9 339 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 MTCH1Q9NZJ7 389 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 CRIM1Q9NZV1 1036 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 MSRB2Q9Y3D2 182 aa12.54□□□□□ -0.4
CDH1-213ENST00000612417 NKX2-6A6NCS4 301 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 ZNF503-AS2A6NEH8 195 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 MKRN2OSH3BPM6 223 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 EWSR1Q01844 656 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDH1-213ENST00000612417 HERPUD1Q15011 391 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 PEA15Q15121 130 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 AVPI1Q5T686 147 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 OR2C3Q8N628 320 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 OR5A2Q8NGI9 324 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 SECTM1Q8WVN6 248 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 AKR1E2Q96JD6 320 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 POM121L2Q96KW2 1035 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 C19orf12Q9NSK7 152 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 ATP23Q9Y6H3 246 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 MAP1BP46821 2468 aaKnown RBP12.53□□□□□ -0.4
CDH1-213ENST00000612417 TRAPPC2LH3BP13 241 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 K7EM74 188 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 FOLR2P14207 255 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 CCNOP22674 350 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 CAMLGP49069 296 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 FOXG1P55316 489 aaPredicted RBP12.53□□□□□ -0.4
CDH1-213ENST00000612417 GUK1Q16774 197 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 ZNF818PQ6ZRF7 136 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 RXFP4Q8TDU9 374 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 RIMS4Q9H426 269 aaPredicted RBP12.53□□□□□ -0.4
CDH1-213ENST00000612417 PLK3Q9H4B4 646 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 PRSS50Q9UI38 385 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 WASF3Q9UPY6 502 aa12.53□□□□□ -0.4
CDH1-213ENST00000612417 UBE2J1Q9Y385 318 aaPredicted RBP12.53□□□□□ -0.4
CDH1-213ENST00000612417 TRBV6-6A0A0A6YYG2 114 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 A0A1B0GW64 132 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 COLCA2A8K830 154 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 ZNF732B4DXR9 585 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 PITX3O75364 302 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 SCTP09683 121 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 CCL2P13500 99 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 UCP1P25874 307 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 NKX2-1P43699 371 aaPredicted RBP12.52□□□□□ -0.4
CDH1-213ENST00000612417 ZNF616Q08AN1 781 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 ZNF266Q14584 549 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 Q6ZS92 163 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 ZNF695Q8IW36 515 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.4
CDH1-213ENST00000612417 LFNGQ8NES3 379 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 EGLN1Q9GZT9 426 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 PARP12Q9H0J9 701 aaKnown RBP12.52□□□□□ -0.4
CDH1-213ENST00000612417 SH3BGRL3Q9H299 93 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 SPACA1Q9HBV2 294 aa12.52□□□□□ -0.4
CDH1-213ENST00000612417 K7N7A8 449 aa12.52□□□□□ -0.41
CDH1-213ENST00000612417 CRYBA1P05813 215 aa12.52□□□□□ -0.41
CDH1-213ENST00000612417 PPT1P50897 306 aa12.52□□□□□ -0.41
CDH1-213ENST00000612417 NMSQ5H8A3 153 aa12.52□□□□□ -0.41
CDH1-213ENST00000612417 GAPTQ8N292 157 aa12.52□□□□□ -0.41
CDH1-213ENST00000612417 RBMXL3Q8N7X1 1067 aaKnown RBP12.52□□□□□ -0.41
CDH1-213ENST00000612417 C15orf54Q8N8G6 183 aa12.52□□□□□ -0.41
CDH1-213ENST00000612417 IL22RA2Q969J5 263 aa12.52□□□□□ -0.41
CDH1-213ENST00000612417 GMPPAQ96IJ6 420 aaPredicted RBP12.52□□□□□ -0.41
CDH1-213ENST00000612417 LYRM2Q9NU23 88 aaPredicted RBP12.52□□□□□ -0.41
CDH1-213ENST00000612417 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
CDH1-213ENST00000612417 ESPL1Q14674 2120 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 IGKV1D-13A0A0B4J2D9 117 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 CD300LBA8K4G0 201 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 FABP1P07148 127 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 IGKV1-13P0DP09 117 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 MMP9P14780 707 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 VDAC1P21796 283 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 FHITP49789 147 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms