RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TCF24Q7RTU0 167 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 STX19Q8N4C7 294 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 CBR4Q8N4T8 237 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 TMEM86BQ8N661 226 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 NPWQ8N729 165 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 OR2Z1Q8NG97 314 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 OR8J3Q8NGG0 315 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 OR8U1Q8NH10 309 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 RCN3Q96D15 328 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 RBMXL1Q96E39 390 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 PYURFQ96I23 114 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 NARS2Q96I59 477 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 ANKRD36BP1Q96IX9 119 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 SCGB3A2Q96PL1 93 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 C20orf144Q9BQM9 153 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 SLC19A3Q9BZV2 496 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 ZSCAN16Q9H4T2 348 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 METTL17Q9H7H0 456 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 TAS2R1Q9NYW7 299 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 VPS29Q9UBQ0 182 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 ANGPT4Q9Y264 503 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 SLC35A3Q9Y2D2 325 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 UFC1Q9Y3C8 167 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 TET2Q6N021 2002 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 SETD5Q9C0A6 1442 aa2.5□□□□□ -2.01
SMCHD1-213ENST00000609587 TGIF2-C20orf24A0A0A6YYL0 155 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 A0A1B0GV90 55 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 IGSF23A1L1A6 192 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 VPS37CA5D8V6 355 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 FAM159BA6NKW6 160 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 NCBP2LA6PVI3 153 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 ATP6V1G2-DDX39BF2Z307 99 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 F5H5K5 113 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 TSTD3H0UI37 97 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 H7C417 338 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 GPR31O00270 319 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 CHP2O43745 196 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 PLIN3O60664 434 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 YIF1AO95070 293 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 S1PR2O95136 353 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 TTC4O95801 387 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 IFNGP01579 166 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 MUC1P15941 1255 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 RAB5AP20339 215 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 USF1P22415 310 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 RPL12P30050 165 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 GRPRP30550 384 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 RPA3P35244 121 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 GALR1P47211 349 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 TAS2R41P59536 307 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 GNG3P63215 75 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 BAXQ07812 192 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 SPA17Q15506 151 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 TPTE2P1Q5T6R2 138 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 SYT6Q5T7P8 510 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 KCTD16Q68DU8 428 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 RPL13AP3Q6NVV1 102 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 C12orf54Q6X4T0 127 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 COX18Q8N8Q8 333 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 OR4K17Q8NGC6 315 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 OR9A2Q8NGT5 310 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 OR51E1Q8TCB6 317 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 ASB13Q8WXK3 278 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 MRPL48Q96GC5 212 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 FAM19A4Q96LR4 140 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 TPT1P8Q9HAU6 139 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 LRTM1Q9HBL6 345 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 RBM22Q9NW64 420 aaKnown RBP eCLIP2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 MTFP1Q9UDX5 166 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 CES1P1Q9UKY3 287 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 ZNF257Q9Y2Q1 563 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 ADAMTSL3P82987 1691 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 NPATQ14207 1427 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 PPIP5K1Q6PFW1 1433 aa2.49□□□□□ -2.01
SMCHD1-213ENST00000609587 MYO10Q9HD67 2058 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 KIF1BO60333 1816 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 A0A0U1RQV1 116 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 TNFRSF11BO00300 401 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 MFNGO00587 321 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 PHYHO14832 338 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 FABP7O15540 132 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 ENSAO43768 121 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 STK16O75716 305 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 HPRT1P00492 218 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 IFNA1P01562 189 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 APCSP02743 223 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 HTR1AP08908 422 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 ESDP10768 282 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 PVALBP20472 110 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 HIST1H1TP22492 207 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 F8A1P23610 371 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 S100PP25815 95 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 RAB38P57729 211 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 C1QTNF8P60827 252 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 RAB5BP61020 215 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 PRR3P79522 188 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 IFITM2Q01629 132 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 MOBPQ13875 183 aa2.48□□□□□ -2.01
SMCHD1-213ENST00000609587 TFDP2Q14188 446 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms