RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 TUSC2O75896 110 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 SFT2D2O95562 160 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 C1QBP02746 253 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 SNRPD2P62316 118 aaKnown RBP18.05■□□□□ 0.48
USP6NL-204ENST00000606752 STUMQ69YW2 141 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 NOXA1Q86UR1 476 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 C1orf87Q8N0U7 546 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 OR10J5Q8NHC4 309 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 KIRREL1Q96J84 757 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 PHB2Q99623 299 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 TAF9BQ9HBM6 251 aa18.05■□□□□ 0.48
USP6NL-204ENST00000606752 CFAP46Q8IYW2 2715 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 OOEPA6NGQ2 149 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 K7N7A8 449 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 MGST3O14880 152 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 SLC22A5O76082 557 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 PRB1P04280 392 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 GLIPR1P48060 266 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 NKX2-5P52952 324 aaPredicted RBP18.04■□□□□ 0.48
USP6NL-204ENST00000606752 C2orf68Q2NKX9 166 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 SLC38A6Q8IZM9 456 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 ZNF561Q8N587 486 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 CASTOR1Q8WTX7 329 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 SDSLQ96GA7 329 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 DLL4Q9NR61 685 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 DCAF16Q9NXF7 216 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 MAB21L2Q9Y586 359 aa18.04■□□□□ 0.48
USP6NL-204ENST00000606752 ABCA4P78363 2273 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 NPIPB11E5RHQ5 1161 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 OR2A4O95047 310 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 SUPT4H1P63272 117 aaKnown RBP18.03■□□□□ 0.48
USP6NL-204ENST00000606752 CLEC18BQ6UXF7 455 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 NLRC3Q7RTR2 1065 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 ZNRF1Q8ND25 227 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 DEFB108BQ8NET1 73 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 IL1F10Q8WWZ1 152 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 OR2A7Q96R45 310 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 TRAF4Q9BUZ4 470 aaPredicted RBP18.03■□□□□ 0.48
USP6NL-204ENST00000606752 DYSFO75923 2080 aa18.03■□□□□ 0.48
USP6NL-204ENST00000606752 TMEM178BH3BS89 294 aa18.02■□□□□ 0.48
USP6NL-204ENST00000606752 GOSR2O14653 212 aa18.02■□□□□ 0.48
USP6NL-204ENST00000606752 GIPP09681 153 aaPredicted RBP18.02■□□□□ 0.48
USP6NL-204ENST00000606752 RPS2P15880 293 aaKnown RBP18.02■□□□□ 0.48
USP6NL-204ENST00000606752 LPCAT3Q6P1A2 487 aa18.02■□□□□ 0.48
USP6NL-204ENST00000606752 PRR18Q8N4B5 295 aa18.02■□□□□ 0.48
USP6NL-204ENST00000606752 OR5D13Q8NGL4 314 aa18.02■□□□□ 0.48
USP6NL-204ENST00000606752 CCL17Q92583 94 aa18.02■□□□□ 0.48
USP6NL-204ENST00000606752 RSRP1Q9BUV0 290 aa18.02■□□□□ 0.48
USP6NL-204ENST00000606752 TMEM106BQ9NUM4 274 aa18.02■□□□□ 0.48
USP6NL-204ENST00000606752 SMLR1H3BR10 107 aa18.02■□□□□ 0.47
USP6NL-204ENST00000606752 GZMKP49863 264 aa18.02■□□□□ 0.47
USP6NL-204ENST00000606752 PIGPP57054 158 aa18.02■□□□□ 0.47
USP6NL-204ENST00000606752 ABCA11PQ4W5N1 156 aa18.02■□□□□ 0.47
USP6NL-204ENST00000606752 C6orf183Q5T699 404 aa18.02■□□□□ 0.47
USP6NL-204ENST00000606752 SGPP2Q8IWX5 399 aa18.02■□□□□ 0.47
USP6NL-204ENST00000606752 H1FOOQ8IZA3 346 aaPredicted RBP18.02■□□□□ 0.47
USP6NL-204ENST00000606752 DRAXINQ8NBI3 349 aaPredicted RBP18.02■□□□□ 0.47
USP6NL-204ENST00000606752 CHIAQ9BZP6 476 aa18.02■□□□□ 0.47
USP6NL-204ENST00000606752 PIPOXQ9P0Z9 390 aa18.02■□□□□ 0.47
USP6NL-204ENST00000606752 ARFGEF3Q5TH69 2177 aa18.01■□□□□ 0.47
USP6NL-204ENST00000606752 TRAV38-1A0A0B4J264 116 aa18.01■□□□□ 0.47
USP6NL-204ENST00000606752 LGALS8O00214 317 aa18.01■□□□□ 0.47
USP6NL-204ENST00000606752 H2BFSP57053 126 aa18.01■□□□□ 0.47
USP6NL-204ENST00000606752 C11orf88Q6PI97 169 aa18.01■□□□□ 0.47
USP6NL-204ENST00000606752 TPRX1Q8N7U7 411 aa18.01■□□□□ 0.47
USP6NL-204ENST00000606752 ZNF486Q96H40 463 aaPredicted RBP18.01■□□□□ 0.47
USP6NL-204ENST00000606752 LURAP1Q96LR2 239 aa18.01■□□□□ 0.47
USP6NL-204ENST00000606752 ZNF665Q9H7R5 613 aa18.01■□□□□ 0.47
USP6NL-204ENST00000606752 A0A0B4J2A0 478 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 CRYM-AS1A6NIL9 109 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 C12orf77C9JDV5 145 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 GYPAP02724 150 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 HLA-GP17693 338 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 RAP2BP61225 183 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 EDDM3AQ14507 147 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 SLC9A3R2Q15599 337 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 ZNF788Q6ZQV5 615 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 MRGPRDQ8TDS7 321 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 GALMQ96C23 342 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 RANBP3Q9H6Z4 567 aaPredicted RBP18■□□□□ 0.47
USP6NL-204ENST00000606752 SLC2A9Q9NRM0 540 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 SHPKQ9UHJ6 478 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 FBXO9Q9UK97 447 aaPredicted RBP18■□□□□ 0.47
USP6NL-204ENST00000606752 OR2W1Q9Y3N9 320 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 PPIAL4EA0A075B759 164 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 TEX13DA0A0J9YY54 714 aaPredicted RBP18■□□□□ 0.47
USP6NL-204ENST00000606752 PPIAL4DF5H284 164 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 C19orf84I3L1E1 186 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 SIX6O95475 246 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 HEXAP06865 529 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 PPIAL4FP0DN26 164 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 IGFBP2P18065 325 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 ERP29P30040 261 aaKnown RBP18■□□□□ 0.47
USP6NL-204ENST00000606752 PPOXP50336 477 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 LIN54Q6MZP7 749 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 TRAT1Q6PIZ9 186 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 ZNF843Q8N446 348 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 ZNF565Q8N9K5 539 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 GAFA1Q96PS6 74 aa18■□□□□ 0.47
USP6NL-204ENST00000606752 VRK1Q99986 396 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms