RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 IL19Q9UHD0 177 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 TAC3Q9UHF0 121 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 SLC22A13Q9Y226 551 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 MRPS2Q9Y399 296 aaKnown RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM131Q92545 1883 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 A0A0A6YYD4 124 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGLV1-36A0A0B4J1U3 117 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TRBV9A0A0B4J1U6 114 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGKV1-8A0A0C4DH67 115 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 A0A0G2JN53 185 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 A0A1B0GVT2 93 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGLC7A0M8Q6 106 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CBY3A6NI87 242 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 NPIPB13A6NJU9 1138 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 GLOD5A6NK44 160 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR5B21A6NL26 309 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 HIDE1A8MVS5 230 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 NPIPB4C9JG80 1138 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 K7EQS6 105 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CORTO00230 105 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 P2RY10O00398 339 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 HS3ST1O14792 307 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SMAD9O15198 467 aaKnown RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SOCS1O15524 211 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 MLNRO43193 412 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ERI3O43414 337 aaKnown RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 HYPMO75409 117 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 KLF8O95600 359 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 GPR75O95800 540 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 PDGFBP01127 241 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 BGLAPP02818 100 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 GPX1P07203 203 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 WNT2P09544 360 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 H2BFMP0C1H6 154 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 C8orf89P0DMQ9 161 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 GDF1P27539 372 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CST5P28325 142 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 GABRA3P34903 492 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TFPI2P48307 235 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 PRRX1P54821 245 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SNU13P55769 128 aaKnown RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CLDN15P56746 228 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CLDN2P57739 230 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 LCN6P62502 163 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CSNK2A1P68400 391 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ARG2P78540 354 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 NHLH1Q02575 133 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 RBPJQ06330 500 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TSTA3Q13630 321 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SHBQ15464 509 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 MSMO1Q15800 293 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 PMCHL1Q16048 86 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SRSF7Q16629 238 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 PRICKLE4Q2TBC4 344 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TDRG1Q3Y452 100 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 FAM78AQ5JUQ0 283 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 C1orf185Q5T7R7 199 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ABHD17BQ5VST6 288 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 WBP2NLQ6ICG8 309 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 LCN10Q6JVE6 187 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CFAP161Q6P656 301 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 C19orf35Q6ZS72 473 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 Q6ZWC4 215 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 DOK3Q7L591 496 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM256Q8N2U0 113 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZIC4Q8N9L1 334 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZFP62Q8NB50 900 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CSNK2A3Q8NEV1 391 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR4C5Q8NGB2 326 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR5AU1Q8NGC0 362 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR5AR1Q8NGP9 310 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR1L6Q8NGR2 347 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR2AJ1Q8NGZ0 328 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR52N5Q8NH56 324 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 CMTM2Q8TAZ6 248 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF519Q8TB69 540 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF721Q8TF20 911 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 C11orf40Q8WZ69 217 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 IL22RA2Q969J5 263 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SDSLQ96GA7 329 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 COX14Q96I36 57 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 AMELYQ99218 206 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SMAD5Q99717 465 aaKnown RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TXNDC17Q9BRA2 123 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 VPS25Q9BRG1 176 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 LRFN3Q9BTN0 628 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ELOVL1Q9BW60 279 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 STRADBQ9C0K7 418 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF700Q9H0M5 742 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR51I2Q9H344 312 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 MMP25Q9NPA2 562 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 MANBALQ9NQG1 85 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF701Q9NV72 531 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 FBXO34Q9NWN3 711 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 MRPL22Q9NWU5 206 aaKnown RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SOHLH2Q9NX45 425 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 WSB2Q9NYS7 404 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 EHFQ9NZC4 300 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 LSM7Q9UK45 103 aaKnown RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 PSG11Q9UQ72 335 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms