RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 SOD3P08294 240 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 SCGB1C2P0DMR2 95 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 F8A1P23610 371 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 PYCR1P32322 319 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 COILP38432 576 aaPredicted RBP2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 NUDT2P50583 147 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 PSMD7P51665 324 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 GOLGA7BQ2TAP0 167 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 TMEM215Q68D42 235 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 PTRHD1Q6GMV3 140 aaKnown RBP2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 ZNF880Q6PDB4 577 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 MUC15Q8N387 334 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 MIR7-3HGQ8N6C7 128 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 TMEM251Q8N6I4 163 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 GATD1Q8NB37 220 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 ST20-AS1Q8NBB2 130 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 OR4P4Q8NGL7 312 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 STOML3Q8TAV4 291 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 SCGB1C1Q8TD33 95 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 TWIST2Q8WVJ9 160 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 RTN4IP1Q8WWV3 396 aaPredicted RBP2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 FXYD5Q96DB9 178 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 LINC01587Q99440 93 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 ANAPC13Q9BS18 74 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 EBPLQ9BY08 206 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 OR51E2Q9H255 320 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 ZNF706Q9Y5V0 76 aaPredicted RBP2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 S4R3C0 116 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 CPS1P31327 1500 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 POLR1AO95602 1720 aaPredicted RBP2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 SIGLEC1Q9BZZ2 1709 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 IQGAP1P46940 1657 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 PREX1Q8TCU6 1659 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 FAM135BQ49AJ0 1406 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 USP32Q8NFA0 1604 aa2.5□□□□□ -2.01
AC004542.1-201ENST00000602955 EIF3AQ14152 1382 aaKnown RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 MYO3BQ8WXR4 1341 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 ASXL1Q8IXJ9 1541 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 PRRC2AP48634 2157 aaKnown RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 SETD1AO15047 1707 aaKnown RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 KNDC1Q76NI1 1749 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 IGLV4-60A0A075B6I1 120 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 C7orf66A4D0T2 115 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 GMNCA6NCL1 334 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 C8orf87E5RJ46 101 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 ATP6V1G2O95670 118 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 CXorf1O96002 111 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 HLA-DMAP28067 261 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 SLC6A1P30531 599 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 TGFBR1P36897 503 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 MPV17P39210 176 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 MAGEA2P43356 314 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 CDC34P49427 236 aaPredicted RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 RAB25P57735 213 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 CTAG1AP78358 180 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 ZNF235Q14590 738 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 LRRC26Q2I0M4 334 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 TBC1D28Q2M2D7 210 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 SLC36A2Q495M3 483 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 CLEC20AQ6ZU45 233 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 OR52E4Q8NGH9 312 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 DTD1Q8TEA8 209 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 CMTM5Q96DZ9 223 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 PEBP4Q96S96 227 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 PRSS27Q9BQR3 290 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 POTEKPQ9BYX7 375 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 ZNF436Q9C0F3 470 aaPredicted RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 LINC00574Q9H8X3 128 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 TMEM38BQ9NVV0 291 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 IL37Q9NZH6 218 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 C14orf166Q9Y224 244 aaKnown RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 MTCH2Q9Y6C9 303 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 BRCA1P38398 1863 aaKnown RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 NCOA3Q9Y6Q9 1424 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 COL16A1Q07092 1604 aaPredicted RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 PPLO60437 1756 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 POLR3AO14802 1390 aaPredicted RBP2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 ABCC11Q96J66 1382 aa2.49□□□□□ -2.01
AC004542.1-201ENST00000602955 CLTCQ00610 1675 aaKnown RBP2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 TMEM250H0YL14 139 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 CCRL2O00421 344 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 RGS5O15539 181 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 CRTAPO75718 401 aaPredicted RBP2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 KLHL2O95198 593 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 IGHV1-46P01743 117 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 S100A6P06703 90 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 PSKH1P11801 424 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 RCVRNP35243 200 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 CBX5P45973 191 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 TGM4P49221 684 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 MGAT3Q09327 533 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 EIF4EBP1Q13541 118 aaPredicted RBP2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 CLEC12BQ2HXU8 276 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 TTMPQ5BVD1 217 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 NXNL2Q5VZ03 156 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 MTERF4Q7Z6M4 381 aaKnown RBP2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 OSR2Q8N2R0 312 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 TMEM156Q8N614 296 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 OR2M3Q8NG83 312 aa2.48□□□□□ -2.01
AC004542.1-201ENST00000602955 OR2K2Q8NGT1 345 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms