RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 GAPDHP04406 335 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 GPR12P47775 334 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 REG1BP48304 166 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 RBM11P57052 281 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 KLHL22Q53GT1 634 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 TGIF2LXQ8IUE1 241 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 ZNF695Q8IW36 515 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 IZUMO1Q8IYV9 350 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 C8orf31Q8N9H6 132 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 Q8N9W7 124 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 TMEM104Q8NE00 496 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 KLHL30-AS1Q8NEE0 82 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 OR52M1Q8NGK5 317 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 DUX3Q96PT4 197 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 ABCG5Q9H222 651 aa14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 SIRT4Q9Y6E7 314 aaPredicted RBP14.14□□□□□ -0.15
CHMP2A-208ENST00000601220 IGHV3-72A0A0B4J1Y9 119 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 NUDT19A8MXV4 375 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 CCRL2O00421 344 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 GEMIN2O14893 280 aaKnown RBP14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 VSIG8P0DPA2 414 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 SLC35B1P78383 322 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 CD69Q07108 199 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 ZFP1Q6P2D0 407 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 RPL22L1Q6P5R6 122 aaKnown RBP14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 MOB3BQ86TA1 216 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 FOXRED2Q8IWF2 684 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 RNF152Q8N8N0 203 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 OR52N1Q8NH53 320 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 GPR148Q8TDV2 347 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 DPF1Q92782 380 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 FAM192AQ9GZU8 254 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 DCLRE1BQ9H816 532 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 FGF20Q9NP95 211 aaPredicted RBP14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 FAM118AQ9NWS6 357 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 ING4Q9UNL4 249 aa14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 RPL36Q9Y3U8 105 aaKnown RBP14.13□□□□□ -0.15
CHMP2A-208ENST00000601220 LOC100130705A0A1B0GUX0 176 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 TMEM30CPA0ZSE6 113 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 WBP4O75554 376 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 OR7C1O76099 320 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 MT-ND4P03905 459 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 RPLP1P05386 114 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 CFHR3Q02985 330 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 PNLIPRP3Q17RR3 467 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 CCDC58Q4VC31 144 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 TEX38Q6PEX7 206 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 UBALD1Q8TB05 177 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 ARL11Q969Q4 196 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 TMEM106AQ96A25 262 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 ORAI1Q96D31 301 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 RBMXL1Q96E39 390 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 METTL9Q9H1A3 318 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 TMEM138Q9NPI0 162 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 LIN7CQ9NUP9 197 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 GFOD1Q9NXC2 390 aa14.12□□□□□ -0.15
CHMP2A-208ENST00000601220 A0A1W2PP11 408 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 ZNF736B4DX44 427 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 CCL24O00175 119 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 AP4M1O00189 453 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 OGG1O15527 345 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 ORC5O43913 435 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 IGFBP3P17936 291 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 CD1BP29016 333 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 ZNF93P35789 620 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 VHLP40337 213 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 ETV1P50549 477 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 ZNF134P52741 427 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 SMN1Q16637 294 aaKnown RBP14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 ZNF497Q6ZNH5 498 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 LCNL1Q6ZST4 164 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 LINC00596Q86U02 117 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 ZNF439Q8NDP4 499 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 OR2T10Q8NGZ9 312 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 CCDC107Q8WV48 283 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 RTN4IP1Q8WWV3 396 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 WWC2-AS2Q96NR7 200 aa14.11□□□□□ -0.15
CHMP2A-208ENST00000601220 NCBP2LA6PVI3 153 aaKnown RBP14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 SDCBPO00560 298 aaPredicted RBP14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 SLC31A2O15432 143 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 CD2P06729 351 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 DGCR2P98153 550 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 KIR2DS1Q14954 304 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 Q3ZCU0 254 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 DDI2Q5TDH0 399 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 OR2G6Q5TZ20 316 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 S1PR3Q99500 378 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 C9orf16Q9BUW7 83 aa14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 LSM4Q9Y4Z0 139 aaKnown RBP14.1□□□□□ -0.15
CHMP2A-208ENST00000601220 IGHV3-43A0A0B4J1X8 118 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 TRBV5-5A0A0J9YX44 114 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 MAGEA13PA6NCF6 341 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 GPX5O75715 221 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 LALBAP00709 142 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 CSTBP04080 98 aaKnown RBP14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 IGHV3-43DP0DP04 118 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 SERPINA2P20848 420 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 BDKRB2P30411 391 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 CDX1P47902 265 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms