RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 ELOVL1Q9BW60 279 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 R4GN57 208 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 GALR2O43603 387 aaPredicted RBP15.76■□□□□ 0.11
UPF1-210ENST00000600689 CDS2O95674 445 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 AMBPP02760 352 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 TK1P04183 234 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 EPHA8P29322 1005 aaPredicted RBP15.76■□□□□ 0.11
UPF1-210ENST00000600689 MLF1P58340 268 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 HLA-BQ31612 363 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 ZNF66Q6ZN08 573 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 M1APQ8TC57 530 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 SCGB1C1Q8TD33 95 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 SPIN2AQ99865 258 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 SPIN2BQ9BPZ2 258 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 SIRT7Q9NRC8 400 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 A0A1B0GW64 132 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 XKRY2A2RUG3 117 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 ZFAND5O76080 213 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 IGLV3-1P01715 115 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 IGFBP7Q16270 282 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 LYSMD4Q5XG99 296 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 FGFBP3Q8TAT2 258 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 IGHV5-10-1A0A0J9YXX1 117 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 C9J4A7 227 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 EREGO14944 169 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 PDGFBP01127 241 aaPredicted RBP15.75■□□□□ 0.11
UPF1-210ENST00000600689 GZMBP10144 247 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 SPSB1Q96BD6 273 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 ATP5SQ99766 215 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 DOCK7Q96N67 2140 aa15.75■□□□□ 0.11
UPF1-210ENST00000600689 CA11O75493 328 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 TAS2R30P59541 319 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 KCNMB1Q16558 191 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 RBMXL1Q96E39 390 aaKnown RBP15.74■□□□□ 0.11
UPF1-210ENST00000600689 C16orf82Q7Z2V1 217 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 MAML2Q8IZL2 1156 aaPredicted RBP15.74■□□□□ 0.11
UPF1-210ENST00000600689 OR5L2Q8NGL0 311 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 SIGLEC12Q96PQ1 595 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 HIST1H2AAQ96QV6 131 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 CDX2Q99626 313 aaPredicted RBP15.74■□□□□ 0.11
UPF1-210ENST00000600689 SMIM7Q9BQ49 75 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 RBKSQ9H477 322 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 OR14J1Q9UGF5 321 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 A0A1B0GU03 582 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 HBE1P02100 147 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 BCL2P10415 239 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 DEFA4P12838 97 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 FIP1L1Q6UN15 594 aaKnown RBP15.74■□□□□ 0.11
UPF1-210ENST00000600689 CCDC74BQ96LY2 380 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 SMDT1Q9H4I9 107 aa15.74■□□□□ 0.11
UPF1-210ENST00000600689 IGHV3-64DA0A0J9YX35 117 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 ZNF732B4DXR9 585 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 HS3ST1O14792 307 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 PAX9P55771 341 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 SPACA9Q96E40 222 aaPredicted RBP15.73■□□□□ 0.11
UPF1-210ENST00000600689 PCGF1Q9BSM1 259 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 OCIAD1Q9NX40 245 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 EXPH5Q8NEV8 1989 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 CYB5R3P00387 301 aaPredicted RBP15.73■□□□□ 0.11
UPF1-210ENST00000600689 BCL3P20749 454 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 MSX1P28360 303 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 ZNF726P1Q15940 193 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 OR8G2PQ6IF36 304 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 OR10A7Q8NGE5 316 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 SAP25Q8TEE9 199 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 RDH5Q92781 318 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 ZNF488Q96MN9 340 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 OR51B6Q9H340 312 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 C11orf1Q9H5F2 150 aa15.73■□□□□ 0.11
UPF1-210ENST00000600689 RBM7Q9Y580 266 aaKnown RBP15.73■□□□□ 0.11
UPF1-210ENST00000600689 IGLV3-12A0A075B6K2 115 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 SLC22A20A6NK97 555 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 NTF4P34130 210 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 RBM11P57052 281 aaKnown RBP15.72■□□□□ 0.11
UPF1-210ENST00000600689 ARL16Q0P5N6 197 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 PMS2P11Q13670 270 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 SLC23A3Q6PIS1 610 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 RABEPKQ7Z6M1 372 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 MRPL41Q8IXM3 137 aaKnown RBP15.72■□□□□ 0.11
UPF1-210ENST00000600689 OR1F12Q8NHA8 337 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 MAFAQ8NHW3 353 aaPredicted RBP15.72■□□□□ 0.11
UPF1-210ENST00000600689 Q9N2K0 584 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 RARRES3Q9UL19 164 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 A0A1B0GUS0 222 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 PSG2P11465 335 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 CTSSP25774 331 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 SPANXN5Q5MJ07 72 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 GATAD1Q8WUU5 269 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 CBLN4Q9NTU7 201 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 TAAR3PQ9P1P4 343 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
UPF1-210ENST00000600689 FUT9Q9Y231 359 aa15.72■□□□□ 0.11
UPF1-210ENST00000600689 ARGFXA6NJG6 315 aa15.71■□□□□ 0.11
UPF1-210ENST00000600689 SERPINE2P07093 398 aa15.71■□□□□ 0.11
UPF1-210ENST00000600689 CCL3P10147 92 aa15.71■□□□□ 0.11
UPF1-210ENST00000600689 FGF7P21781 194 aa15.71■□□□□ 0.11
UPF1-210ENST00000600689 ZFP36L1Q07352 338 aaKnown RBP15.71■□□□□ 0.11
UPF1-210ENST00000600689 HERPUD1Q15011 391 aa15.71■□□□□ 0.11
UPF1-210ENST00000600689 LHFPL2Q6ZUX7 228 aa15.71■□□□□ 0.11
UPF1-210ENST00000600689 YRDCQ86U90 279 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms