RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 C8orf31Q8N9H6 132 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 OR4X2Q8NGF9 303 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 OR10X1Q8NGY0 326 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 FBLIM1Q8WUP2 373 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 THRSPQ92748 146 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 ORAI1Q96D31 301 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 ZNF581Q9P0T4 197 aa12.58□□□□□ -0.4
VRK3-221ENST00000600284 TRAV8-7A0A075B6U6 113 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 A0A1W2PPI3 338 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 TCRBV4S1A1TA0A5B7 111 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 C15orf65H3BRN8 121 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 FGF16O43320 207 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 ZNF816Q0VGE8 651 aaPredicted RBP12.57□□□□□ -0.4
VRK3-221ENST00000600284 LTC4SQ16873 150 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 Q3ZCU0 254 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 ZNF497Q6ZNH5 498 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 STX19Q8N4C7 294 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 LINC00311Q8N616 119 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 DRAM1Q8N682 238 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 OR56B4Q8NH76 319 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 RAB9BQ9NP90 201 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 PSORS1C1Q9UIG5 152 aa12.57□□□□□ -0.4
VRK3-221ENST00000600284 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 FAM90A10PA6NDY2 464 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 FAM90A7PA6NKC0 464 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 FAM90A23PA8MXZ1 464 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 CASQ2O14958 399 aaPredicted RBP12.56□□□□□ -0.4
VRK3-221ENST00000600284 IGHV3-7P01780 117 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 MT-ND4P03905 459 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 GAPDHP04406 335 aaKnown RBP12.56□□□□□ -0.4
VRK3-221ENST00000600284 GNG10P50151 68 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 WNT4P56705 351 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 DOC2BQ14184 412 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 EBI3Q14213 229 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 HES1Q14469 280 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 OXLD1Q5BKU9 147 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 TCTEX1D4Q5JR98 221 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 OGFRL1Q5TC84 451 aaPredicted RBP12.56□□□□□ -0.4
VRK3-221ENST00000600284 GLIPR1L1Q6UWM5 242 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 JAGN1Q8N5M9 183 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 NEK7Q8TDX7 302 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 MYDGFQ969H8 173 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 ARL11Q969Q4 196 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 OR14A2Q96R54 314 aa12.56□□□□□ -0.4
VRK3-221ENST00000600284 RCC2Q9P258 522 aaKnown RBP12.56□□□□□ -0.4
VRK3-221ENST00000600284 MRPS28Q9Y2Q9 187 aaKnown RBP12.56□□□□□ -0.4
VRK3-221ENST00000600284 A0A1W2PP11 408 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 MAGEA13PA6NCF6 341 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 MCRIP1C9JLW8 97 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 AIPO00170 330 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 MYL12BO14950 172 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 CA11O75493 328 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 GLAP06280 429 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 PF4V1P10720 104 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 TMEM11P17152 192 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 MAPK3P27361 379 aaPredicted RBP12.55□□□□□ -0.4
VRK3-221ENST00000600284 DIAPH2-AS1Q14236 149 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 C9orf152Q5JTZ5 239 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 LAIR2Q6ISS4 152 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 LYPD6Q86Y78 171 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 GAPTQ8N292 157 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 NANOGP1Q8N7R0 232 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 NKAIN3Q8N8D7 197 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 MUL1Q969V5 352 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 DERL3Q96Q80 235 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 GFOD1Q9NXC2 390 aa12.55□□□□□ -0.4
VRK3-221ENST00000600284 A0A1W2PPK0 400 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 A0A1W2PRX2 142 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 SH2D7A6NKC9 451 aaPredicted RBP12.54□□□□□ -0.4
VRK3-221ENST00000600284 CCRL2O00421 344 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 SDCBPO00560 298 aaPredicted RBP12.54□□□□□ -0.4
VRK3-221ENST00000600284 HSD17B6O14756 317 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 MAS1P04201 325 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 GNAO1P09471 354 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 CELP19835 753 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 CD33P20138 364 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 IL3RAP26951 378 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 LOXL3P58215 753 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 RNLSQ5VYX0 342 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 AWAT2Q6E213 333 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 TRAT1Q6PIZ9 186 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 AHSA2Q719I0 299 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 BPIFB6Q8NFQ5 453 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 CHPT1Q8WUD6 406 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 UQCC2Q9BRT2 126 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 VCXQ9H320 206 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 NECAP2Q9NVZ3 263 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 FKBP14Q9NWM8 211 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 GHRLQ9UBU3 117 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 ERGIC3Q9Y282 383 aa12.54□□□□□ -0.4
VRK3-221ENST00000600284 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 IGHV1-3A0A0C4DH29 117 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 A0A1W2PPE3 182 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 PSMB11A5LHX3 300 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 SPINT2O43291 252 aa12.53□□□□□ -0.4
VRK3-221ENST00000600284 IGKV1D-33P01593 117 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms